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    PHF23 PHD finger protein 23 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714538, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PHF23provided by VGNC
    Official Full Name
    PHD finger protein 23provided by VGNC
    Primary source
    VGNC:VGNC:75877
    Locus tag
    EGK_08108
    See related
    Ensembl:ENSMMUG00000010543
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PHF23 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (7002525..7007014, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (7211584..7216050, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA dehydrogenase very long chain Neighboring gene microRNA mir-324 Neighboring gene dishevelled segment polarity protein 2 Neighboring gene GABA type A receptor-associated protein Neighboring gene CTD nuclear envelope phosphatase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of autophagosome maturation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PHD finger protein 23
    Names
    PDH-containing protein JUNE-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194348.2 → NP_001181277.1  PHD finger protein 23

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000155
      UniProtKB/TrEMBL
      F7D0J7, H9ZDG3
      Related
      ENSMMUP00000013822.4, ENSMMUT00000014754.4
      Conserved Domains (1) summary
      cd15631
      Location:337 → 380
      PHD_PHF23; PHD finger found in PHD finger protein 23 (PHF23)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      7002525..7007014 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001106748.4 → XP_001106748.1  PHD finger protein 23 isoform X1

      See identical proteins and their annotated locations for XP_001106748.1

      UniProtKB/TrEMBL
      A0A8J8XH89, F7EZK5, G7NID5, H9ZDG3
      Related
      ENSMMUP00000035322.3, ENSMMUT00000042322.3
      Conserved Domains (1) summary
      cd15631
      Location:341 → 384
      PHD_PHF23; PHD finger found in PHD finger protein 23 (PHF23)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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