U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TM9SF1 transmembrane 9 superfamily member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715472, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    TM9SF1
    Gene description
    transmembrane 9 superfamily member 1
    Locus tag
    EGK_18055
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TM9SF1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (86278277..86285203, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (85602021..85609802, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene interferon regulatory factor 9 Neighboring gene REC8 meiotic recombination protein Neighboring gene importin 4 Neighboring gene testis specific serine kinase 4 Neighboring gene charged multivesicular body protein 4A

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein localization to membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transmembrane 9 superfamily member 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266461.1 → NP_001253390.1  transmembrane 9 superfamily member 1 precursor

      See identical proteins and their annotated locations for NP_001253390.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045276
      UniProtKB/TrEMBL
      A0A8J8XZZ1, G7MX66, H9EP60
      Conserved Domains (1) summary
      pfam02990
      Location:59 → 562
      EMP70; Endomembrane protein 70

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      86278277..86285203 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850508.1 → XP_028706341.1  transmembrane 9 superfamily member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XZZ1, G7MX66, H9EP60
      Conserved Domains (1) summary
      pfam02990
      Location:59 → 562
      EMP70; Endomembrane protein 70

    2. XM_015143351.2 → XP_014998837.1  transmembrane 9 superfamily member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XZZ1, G7MX66, H9EP60
      Conserved Domains (1) summary
      pfam02990
      Location:59 → 562
      EMP70; Endomembrane protein 70

    3. XM_015143352.2 → XP_014998838.1  transmembrane 9 superfamily member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XZZ1, G7MX66, H9EP60
      Conserved Domains (1) summary
      pfam02990
      Location:59 → 562
      EMP70; Endomembrane protein 70

    4. XM_015143353.2 → XP_014998839.1  transmembrane 9 superfamily member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XZZ1, G7MX66, H9EP60
      Conserved Domains (1) summary
      pfam02990
      Location:59 → 562
      EMP70; Endomembrane protein 70

    5. XM_028850507.1 → XP_028706340.1  transmembrane 9 superfamily member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XZZ1, G7MX66, H9EP60
      Conserved Domains (1) summary
      pfam02990
      Location:59 → 562
      EMP70; Endomembrane protein 70

    6. XM_015143355.2 → XP_014998841.1  transmembrane 9 superfamily member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XZZ1, G7MX66, H9EP60
      Conserved Domains (1) summary
      pfam02990
      Location:59 → 562
      EMP70; Endomembrane protein 70
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.