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    SH3BP4 SH3 domain binding protein 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693393, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SH3BP4provided by VGNC
    Official Full Name
    SH3 domain binding protein 4provided by VGNC
    Primary source
    VGNC:VGNC:77202
    See related
    Ensembl:ENSMMUG00000013808
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SH3BP4 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (122364236..122468880)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (117525706..117585334)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671538 Neighboring gene uncharacterized LOC114671539 Neighboring gene centrosomal protein of 19 kDa pseudogene Neighboring gene uncharacterized LOC106992777

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SH3 domain-binding protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261601.1 → NP_001248530.1  SH3 domain-binding protein 4

      See identical proteins and their annotated locations for NP_001248530.1

      Status: PROVISIONAL

      Source sequence(s)
      JV043405
      UniProtKB/TrEMBL
      F6T6Y1, G7N985
      Related
      ENSMMUP00000070343.1, ENSMMUT00000094134.1
      Conserved Domains (3) summary
      cd11757
      Location:59 → 110
      SH3_SH3BP4; Src Homology 3 domain of SH3 domain-binding protein 4
      pfam07653
      Location:658 → 719
      SH3_2; Variant SH3 domain
      cl02517
      Location:324 → 404
      ZU5; ZU5 domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      122364236..122468880
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028830360.1 → XP_028686193.1  SH3 domain-binding protein 4 isoform X1

      UniProtKB/TrEMBL
      F6T6Y1, G7N985
      Related
      ENSMMUP00000075609.1, ENSMMUT00000107516.1
      Conserved Domains (3) summary
      cd11757
      Location:59 → 110
      SH3_SH3BP4; Src Homology 3 domain of SH3 domain-binding protein 4
      pfam07653
      Location:658 → 719
      SH3_2; Variant SH3 domain
      cl02517
      Location:324 → 404
      ZU5; ZU5 domain

    2. XM_028830364.1 → XP_028686197.1  SH3 domain-binding protein 4 isoform X1

      UniProtKB/TrEMBL
      F6T6Y1, G7N985
      Conserved Domains (3) summary
      cd11757
      Location:59 → 110
      SH3_SH3BP4; Src Homology 3 domain of SH3 domain-binding protein 4
      pfam07653
      Location:658 → 719
      SH3_2; Variant SH3 domain
      cl02517
      Location:324 → 404
      ZU5; ZU5 domain

    3. XM_028830362.1 → XP_028686195.1  SH3 domain-binding protein 4 isoform X1

      UniProtKB/TrEMBL
      F6T6Y1, G7N985
      Conserved Domains (3) summary
      cd11757
      Location:59 → 110
      SH3_SH3BP4; Src Homology 3 domain of SH3 domain-binding protein 4
      pfam07653
      Location:658 → 719
      SH3_2; Variant SH3 domain
      cl02517
      Location:324 → 404
      ZU5; ZU5 domain

    4. XM_028830363.1 → XP_028686196.1  SH3 domain-binding protein 4 isoform X1

      UniProtKB/TrEMBL
      F6T6Y1, G7N985
      Conserved Domains (3) summary
      cd11757
      Location:59 → 110
      SH3_SH3BP4; Src Homology 3 domain of SH3 domain-binding protein 4
      pfam07653
      Location:658 → 719
      SH3_2; Variant SH3 domain
      cl02517
      Location:324 → 404
      ZU5; ZU5 domain

    5. XM_028830361.1 → XP_028686194.1  SH3 domain-binding protein 4 isoform X1

      UniProtKB/TrEMBL
      F6T6Y1, G7N985
      Related
      ENSMMUP00000079552.1, ENSMMUT00000097900.1
      Conserved Domains (3) summary
      cd11757
      Location:59 → 110
      SH3_SH3BP4; Src Homology 3 domain of SH3 domain-binding protein 4
      pfam07653
      Location:658 → 719
      SH3_2; Variant SH3 domain
      cl02517
      Location:324 → 404
      ZU5; ZU5 domain
    Nucleotide Protein
    Heading Accession and Version

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