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    AATF apoptosis antagonizing transcription factor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717586, updated on 17-Aug-2024

    Summary

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    Official Symbol
    AATFprovided by VGNC
    Official Full Name
    apoptosis antagonizing transcription factorprovided by VGNC
    Primary source
    VGNC:VGNC:69475
    See related
    Ensembl:ENSMMUG00000021669
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See AATF in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (34050978..34162703, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (42960456..43072290)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene acetyl-CoA carboxylase alpha Neighboring gene high mobility group protein B1 pseudogene Neighboring gene uncharacterized LOC106994023 Neighboring gene uncharacterized LOC106994020 Neighboring gene uncharacterized LOC114673110 Neighboring gene LIM homeobox 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein AATF

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257577.1 → NP_001244506.1  protein AATF

      See identical proteins and their annotated locations for NP_001244506.1

      Status: PROVISIONAL

      Source sequence(s)
      JU333969
      UniProtKB/TrEMBL
      G7NI10, H9FSW5
      Related
      ENSMMUP00000076741.1, ENSMMUT00000090838.1
      Conserved Domains (2) summary
      pfam08164
      Location:466 → 550
      TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
      pfam13339
      Location:224 → 375
      AATF-Che1; Apoptosis antagonizing transcription factor

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      34050978..34162703 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials