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    PCGF2 polycomb group ring finger 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694187, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PCGF2provided by VGNC
    Official Full Name
    polycomb group ring finger 2provided by VGNC
    Primary source
    VGNC:VGNC:104640
    See related
    Ensembl:ENSMMUG00000052879
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PCGF2 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (49798248..49814199, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (44429974..44444020, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene MLLT6, PHD finger containing Neighboring gene uncharacterized LOC106994031 Neighboring gene 5S ribosomal RNA Neighboring gene CDGSH iron sulfur domain 3 Neighboring gene uncharacterized LOC106994032 Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene U6 spliceosomal RNA Neighboring gene proteasome 20S subunit beta 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables promoter-specific chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of PRC1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polycomb group RING finger protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265939.1 → NP_001252868.1  polycomb group RING finger protein 2

      See identical proteins and their annotated locations for NP_001252868.1

      Status: PROVISIONAL

      Source sequence(s)
      JV636364
      UniProtKB/TrEMBL
      F7EIY7, G7NH50
      Conserved Domains (3) summary
      PLN02217
      Location:236 → 328
      PLN02217; probable pectinesterase/pectinesterase inhibitor
      cd16736
      Location:12 → 65
      RING-HC_PCGF4; RING finger found in polycomb group RING finger protein 4 (PCGF4) and similar proteins
      cd17164
      Location:130 → 228
      RAWUL_PCGF2; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 2 (PCGF2)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      49798248..49814199 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028835468.1 → XP_028691301.1  polycomb group RING finger protein 2 isoform X1

      UniProtKB/TrEMBL
      F7EIY7, G7NH50
      Conserved Domains (3) summary
      PLN02217
      Location:236 → 328
      PLN02217; probable pectinesterase/pectinesterase inhibitor
      cd16736
      Location:12 → 65
      RING-HC_PCGF4; RING finger found in polycomb group RING finger protein 4 (PCGF4) and similar proteins
      cd17164
      Location:130 → 228
      RAWUL_PCGF2; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 2 (PCGF2)

    2. XM_015119475.2 → XP_014974961.1  polycomb group RING finger protein 2 isoform X1

      UniProtKB/TrEMBL
      F7EIY7, G7NH50
      Related
      ENSMMUP00000072823.1, ENSMMUT00000102020.1
      Conserved Domains (3) summary
      PLN02217
      Location:236 → 328
      PLN02217; probable pectinesterase/pectinesterase inhibitor
      cd16736
      Location:12 → 65
      RING-HC_PCGF4; RING finger found in polycomb group RING finger protein 4 (PCGF4) and similar proteins
      cd17164
      Location:130 → 228
      RAWUL_PCGF2; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 2 (PCGF2)

    3. XM_015119476.1 → XP_014974962.1  polycomb group RING finger protein 2 isoform X1

      UniProtKB/TrEMBL
      F7EIY7, G7NH50
      Conserved Domains (3) summary
      PLN02217
      Location:236 → 328
      PLN02217; probable pectinesterase/pectinesterase inhibitor
      cd16736
      Location:12 → 65
      RING-HC_PCGF4; RING finger found in polycomb group RING finger protein 4 (PCGF4) and similar proteins
      cd17164
      Location:130 → 228
      RAWUL_PCGF2; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 2 (PCGF2)
    Nucleotide Protein
    Heading Accession and Version

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