U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CCN3 cellular communication network factor 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702196, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CCN3provided by VGNC
    Official Full Name
    cellular communication network factor 3provided by VGNC
    Primary source
    VGNC:VGNC:70932
    Locus tag
    EGK_19231
    See related
    Ensembl:ENSMMUG00000005631
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    NOV
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CCN3 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (119688615..119696463)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (118611987..118619835)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114680326 Neighboring gene small nucleolar RNA SNORA32 Neighboring gene uncharacterized LOC106999915 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 2 Neighboring gene small nucleolar RNA SNORD55/SNORD39

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heparin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables integrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    CCN family member 3
    Names
    Protein NOV-like protein
    nephroblastoma overexpressed
    protein NOV homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266896.1 → NP_001253825.1  CCN family member 3 precursor

      See identical proteins and their annotated locations for NP_001253825.1

      Status: PROVISIONAL

      Source sequence(s)
      JV565130
      UniProtKB/TrEMBL
      A0A8J8Y4E9, F6WCM6, G7N008
      Related
      ENSMMUP00000007443.2, ENSMMUT00000007918.4
      Conserved Domains (4) summary
      smart00121
      Location:33 → 95
      IB; Insulin growth factor-binding protein homologues
      smart00041
      Location:269 → 338
      CT; C-terminal cystine knot-like domain (CTCK)
      smart00214
      Location:110 → 170
      VWC; von Willebrand factor (vWF) type C domain
      pfam19035
      Location:206 → 249
      TSP1_CCN; CCN3 Nov like TSP1 domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      119688615..119696463
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials