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    NCKIPSD NCK interacting protein with SH3 domain [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709410, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NCKIPSDprovided by VGNC
    Official Full Name
    NCK interacting protein with SH3 domainprovided by VGNC
    Primary source
    VGNC:VGNC:74960
    See related
    Ensembl:ENSMMUG00000014720
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See NCKIPSD in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (104734691..104747064, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (93762933..93775305)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene cadherin EGF LAG seven-pass G-type receptor 3 Neighboring gene uncharacterized LOC114676346 Neighboring gene inositol hexakisphosphate kinase 2 Neighboring gene protein kinase cAMP-dependent type II regulatory subunit alpha Neighboring gene uncharacterized LOC114676347

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Arp2/3 complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NCK-interacting protein with SH3 domain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257711.1 → NP_001244640.1  NCK-interacting protein with SH3 domain

      See identical proteins and their annotated locations for NP_001244640.1

      Status: PROVISIONAL

      Source sequence(s)
      JU322722
      UniProtKB/TrEMBL
      A0A5F8A394, F7GBC7, H9EVR9
      Related
      ENSMMUP00000019324.3, ENSMMUT00000020650.4
      Conserved Domains (2) summary
      cd11849
      Location:1 → 54
      SH3_SPIN90; Src homology 3 domain of SH3 protein interacting with Nck, 90 kDa (SPIN90)
      pfam09431
      Location:559 → 676
      DUF2013; Protein of unknown function (DUF2013)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      104734691..104747064 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130970.2 → XP_014986456.1  NCK-interacting protein with SH3 domain isoform X2

      UniProtKB/TrEMBL
      A0A5F8A394
      Related
      ENSMMUP00000063753.1, ENSMMUT00000091629.1
      Conserved Domains (2) summary
      cd11849
      Location:1 → 54
      SH3_SPIN90; Src homology 3 domain of SH3 protein interacting with Nck, 90 kDa (SPIN90)
      pfam09431
      Location:566 → 683
      DUF2013; Protein of unknown function (DUF2013)

    2. XM_028843308.1 → XP_028699141.1  NCK-interacting protein with SH3 domain isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZYQ5
      Conserved Domains (1) summary
      pfam09431
      Location:573 → 690
      DUF2013; Protein of unknown function (DUF2013)

    3. XM_028843311.1 → XP_028699144.1  NCK-interacting protein with SH3 domain isoform X6

      UniProtKB/TrEMBL
      A0A5F7ZYQ5
      Conserved Domains (1) summary
      pfam09431
      Location:481 → 598
      DUF2013; Protein of unknown function (DUF2013)

    4. XM_015130971.2 → XP_014986457.1  NCK-interacting protein with SH3 domain isoform X5

      UniProtKB/TrEMBL
      A0A5F7ZYQ5
      Conserved Domains (1) summary
      pfam09431
      Location:488 → 605
      DUF2013; Protein of unknown function (DUF2013)

    5. XM_028843310.1 → XP_028699143.1  NCK-interacting protein with SH3 domain isoform X4

      UniProtKB/TrEMBL
      A0A5F7ZYQ5
      Conserved Domains (1) summary
      pfam09431
      Location:564 → 681
      DUF2013; Protein of unknown function (DUF2013)

    6. XM_028843309.1 → XP_028699142.1  NCK-interacting protein with SH3 domain isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZYQ5
      Conserved Domains (1) summary
      pfam09431
      Location:566 → 683
      DUF2013; Protein of unknown function (DUF2013)
    Nucleotide Protein
    Heading Accession and Version

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