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    STRN3 striatin 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717081, updated on 17-Aug-2024

    Summary

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    Official Symbol
    STRN3provided by VGNC
    Official Full Name
    striatin 3provided by VGNC
    Primary source
    VGNC:VGNC:78127
    See related
    Ensembl:ENSMMUG00000011515
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See STRN3 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (92980747..93114897, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (92281058..92420873, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L27 pseudogene Neighboring gene uncharacterized LOC114679546 Neighboring gene cochlin Neighboring gene HIG1 domain family member 1A, mitochondrial pseudogene Neighboring gene intraflagellar transport protein 20 homolog pseudogene Neighboring gene microRNA mir-624 Neighboring gene adaptor related protein complex 4 subunit sigma 1 Neighboring gene HECT domain E3 ubiquitin protein ligase 1 Neighboring gene U6 spliceosomal RNA Neighboring gene asparagine--tRNA ligase, cytoplasmic pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables armadillo repeat domain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein phosphatase 2A binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein-containing complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in dendrite IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    striatin-3
    Names
    nuclear autoantigen
    striatin, calmodulin binding protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      92980747..93114897 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015143492.2 → XP_014998978.1  striatin-3 isoform X4

      UniProtKB/TrEMBL
      F7C5N3, H9F9P2
      Related
      ENSMMUP00000015119.3, ENSMMUT00000016132.4
      Conserved Domains (4) summary
      COG2319
      Location:382 → 711
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:391 → 712
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      pfam08232
      Location:64 → 190
      Striatin; Striatin family
      sd00039
      Location:401 → 447
      7WD40; WD40 repeat [structural motif]

    2. XM_015143490.2 → XP_014998976.1  striatin-3 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q8D3, G7MXE5
      Related
      ENSMMUP00000044301.2, ENSMMUT00000066246.2
      Conserved Domains (4) summary
      COG2319
      Location:429 → 758
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:438 → 759
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      pfam08232
      Location:64 → 190
      Striatin; Striatin family
      sd00039
      Location:448 → 494
      7WD40; WD40 repeat [structural motif]

    3. XM_015143491.2 → XP_014998977.1  striatin-3 isoform X3

      UniProtKB/TrEMBL
      F7C5Q4, H9F9P2
      Related
      ENSMMUP00000015115.4, ENSMMUT00000016128.4
      Conserved Domains (4) summary
      COG2319
      Location:323 → 748
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:428 → 749
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      pfam08232
      Location:64 → 190
      Striatin; Striatin family
      sd00039
      Location:438 → 484
      7WD40; WD40 repeat [structural motif]

    4. XM_015143489.2 → XP_014998975.1  striatin-3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QRZ9, G7MXE5
      Related
      ENSMMUP00000050827.2, ENSMMUT00000076704.2
      Conserved Domains (4) summary
      COG2319
      Location:466 → 795
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:475 → 796
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      pfam08232
      Location:64 → 190
      Striatin; Striatin family
      sd00039
      Location:485 → 531
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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