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    RDX radixin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709018, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RDXprovided by VGNC
    Official Full Name
    radixinprovided by VGNC
    Primary source
    VGNC:VGNC:76888
    See related
    Ensembl:ENSMMUG00000002241
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RDX in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (103355169..103470632, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (103076582..103194760, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerases I, II, and III subunit RPABC1 pseudogene Neighboring gene zinc finger CCCH-type containing 12C Neighboring gene ferredoxin 1 Neighboring gene Rho GTPase activating protein 20

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cell adhesion molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of early endosome to late endosome transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of protein localization to early endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell shape IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of organelle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in apical part of cell IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in filopodium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microvillus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    radixin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      103355169..103470632 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833948.1 → XP_028689781.1  radixin isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q9N1, F6VZ13
      Conserved Domains (3) summary
      smart00295
      Location:7 → 206
      B41; Band 4.1 homologues
      cd13194
      Location:200 → 296
      FERM_C_ERM; FERM domain C-lobe/F3 of the ERM family
      pfam00769
      Location:347 → 583
      ERM; Ezrin/radixin/moesin family

    2. XM_015115632.2 → XP_014971118.2  radixin isoform X2

      Conserved Domains (3) summary
      smart00295
      Location:27 → 70
      B41; Band 4.1 homologues
      cd13194
      Location:64 → 160
      FERM_C_ERM; FERM domain C-lobe/F3 of the ERM family
      pfam00769
      Location:211 → 447
      ERM; Ezrin/radixin/moesin family

    3. XM_028833947.1 → XP_028689780.1  radixin isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q9N1, F6VZ13
      Related
      ENSMMUP00000002993.4, ENSMMUT00000003172.4
      Conserved Domains (3) summary
      smart00295
      Location:7 → 206
      B41; Band 4.1 homologues
      cd13194
      Location:200 → 296
      FERM_C_ERM; FERM domain C-lobe/F3 of the ERM family
      pfam00769
      Location:347 → 583
      ERM; Ezrin/radixin/moesin family
    Nucleotide Protein
    Heading Accession and Version

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