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    DESI1 desumoylating isopeptidase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708088, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DESI1provided by VGNC
    Official Full Name
    desumoylating isopeptidase 1provided by VGNC
    Primary source
    VGNC:VGNC:71702
    Locus tag
    EGK_03093
    See related
    Ensembl:ENSMMUG00000050219
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    PPPDE2
    Orthologs
    human mouse all
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    Genomic context

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    See DESI1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (9884714..9907262)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (83685197..83707369, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene chromosome 10 C22orf46 homolog Neighboring gene U6 spliceosomal RNA Neighboring gene small nuclear ribonucleoprotein 13 Neighboring gene X-ray repair cross complementing 6 Neighboring gene phosphomannomutase 1 Neighboring gene cold shock domain containing C2 Neighboring gene uncharacterized LOC114670348

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein modification by small protein removal IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    desumoylating isopeptidase 1
    Names
    PPPDE peptidase domain containing 2
    PPPDE peptidase domain-containing protein 2
    NP_001253874.1
    XP_015005887.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266945.1 → NP_001253874.1  desumoylating isopeptidase 1

      See identical proteins and their annotated locations for NP_001253874.1

      Status: PROVISIONAL

      Source sequence(s)
      JV044554
      UniProtKB/TrEMBL
      A0A5F7ZGE2, A0A8J8YFG0, G7N3Z4
      Related
      ENSMMUP00000063698.1, ENSMMUT00000092185.1
      Conserved Domains (1) summary
      pfam05903
      Location:7 → 149
      Peptidase_C97; PPPDE putative peptidase domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      9884714..9907262
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015150401.2 → XP_015005887.1  desumoylating isopeptidase 1 isoform X1

      Conserved Domains (1) summary
      pfam05903
      Location:13 → 125
      Peptidase_C97; PPPDE putative peptidase domain
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials