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    FGD5 FYVE, RhoGEF and PH domain containing 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702022, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FGD5provided by VGNC
    Official Full Name
    FYVE, RhoGEF and PH domain containing 5provided by VGNC
    Primary source
    VGNC:VGNC:72533
    See related
    Ensembl:ENSMMUG00000018446
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See FGD5 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (146161652..146284542)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (51464900..51587457, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106996817 Neighboring gene coiled-coil domain containing 174 Neighboring gene chromosome 2 C3orf20 homolog Neighboring gene uncharacterized LOC106996816 Neighboring gene basic salivary proline-rich protein 1-like Neighboring gene nuclear receptor subfamily 2 group C member 2 Neighboring gene mitochondrial ribosomal protein S25

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    FYVE, RhoGEF and PH domain-containing protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      146161652..146284542
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130182.2 → XP_014985668.2  FYVE, RhoGEF and PH domain-containing protein 5

      UniProtKB/TrEMBL
      F7HES7, G7N7T4
      Related
      ENSMMUP00000024270.4, ENSMMUT00000025936.4
      Conserved Domains (5) summary
      cd13237
      Location:1402 → 1493
      PH2_FGD5_FGD6; FYVE, RhoGEF and PH domain containing/faciogenital dysplasia proteins 5 and 6 pleckstrin homology (PH) domain, C-terminus
      TIGR00927
      Location:178 → 366
      2A1904; K+-dependent Na+/Ca+ exchanger
      cd15792
      Location:1137 → 1259
      PH1_FGD5; FYVE, RhoGEF and PH domain containing/faciogenital dysplasia protein 5, N-terminal Pleckstrin Homology (PH) domain
      cd15742
      Location:1273 → 1339
      FYVE_FGD5; FYVE-like domain found in FYVE, RhoGEF and PH domain-containing protein 5 (FGD5) and similar proteins
      pfam00621
      Location:932 → 1118
      RhoGEF; RhoGEF domain
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials