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    INO80D INO80 complex subunit D [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706610, updated on 17-Aug-2024

    Summary

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    Official Symbol
    INO80Dprovided by VGNC
    Official Full Name
    INO80 complex subunit Dprovided by VGNC
    Primary source
    VGNC:VGNC:99373
    Locus tag
    EGK_04716
    See related
    Ensembl:ENSMMUG00000001053
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See INO80D in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (93407907..93502933, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (87751553..87846381, complement)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene par-3 family cell polarity regulator beta Neighboring gene uncharacterized LOC106992698 Neighboring gene neuropilin 2 Neighboring gene 60S ribosomal protein L27 pseudogene Neighboring gene small nucleolar RNA SNORD51 Neighboring gene NADH:ubiquinone oxidoreductase core subunit S1 Neighboring gene eukaryotic translation elongation factor 1 beta 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    INO80 complex subunit D

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      93407907..93502933 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015110776.2 → XP_014966262.1  INO80 complex subunit D isoform X2

      UniProtKB/TrEMBL
      A0A663D6D8, A0A8J8XXC6, F6QNA4, G7N8Q7
      Related
      ENSMMUP00000001411.4, ENSMMUT00000001500.4
      Conserved Domains (3) summary
      PRK14971
      Location:211 → 290
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05109
      Location:914 → 1025
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam13891
      Location:18 → 79
      zf-C3Hc3H; Potential DNA-binding domain

    2. XM_015110780.2 → XP_014966266.1  INO80 complex subunit D isoform X3

      Conserved Domains (3) summary
      PRK14971
      Location:106 → 185
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05109
      Location:809 → 920
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam13891
      Location:342 → 406
      zf-C3Hc3H; Potential DNA-binding domain

    3. XM_028831021.1 → XP_028686854.1  INO80 complex subunit D isoform X2

      UniProtKB/TrEMBL
      A0A663D6D8, A0A8J8XXC6, F6QNA4, G7N8Q7
      Related
      ENSMMUP00000079426.1, ENSMMUT00000104957.1
      Conserved Domains (3) summary
      PRK14971
      Location:211 → 290
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05109
      Location:914 → 1025
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam13891
      Location:18 → 79
      zf-C3Hc3H; Potential DNA-binding domain

    4. XM_015110775.2 → XP_014966261.1  INO80 complex subunit D isoform X1

      Conserved Domains (1) summary
      pfam13891
      Location:50 → 108
      zf-C3Hc3H; Potential DNA-binding domain

    5. XM_015110779.2 → XP_014966265.1  INO80 complex subunit D isoform X3

      Conserved Domains (3) summary
      PRK14971
      Location:106 → 185
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05109
      Location:809 → 920
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam13891
      Location:342 → 406
      zf-C3Hc3H; Potential DNA-binding domain

    6. XM_015110777.2 → XP_014966263.1  INO80 complex subunit D isoform X2

      UniProtKB/TrEMBL
      A0A663D6D8, A0A8J8XXC6, F6QNA4, G7N8Q7
      Conserved Domains (3) summary
      PRK14971
      Location:211 → 290
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05109
      Location:914 → 1025
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam13891
      Location:18 → 79
      zf-C3Hc3H; Potential DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version

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