U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    BCOR BCL6 corepressor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698644, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    BCORprovided by VGNC
    Official Full Name
    BCL6 corepressorprovided by VGNC
    Primary source
    VGNC:VGNC:97738
    See related
    Ensembl:ENSMMUG00000005292
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See BCOR in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (39882522..40011694, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (39941354..40069928, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S11-like Neighboring gene uncharacterized LOC114674857 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC114674853

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    BCL-6 corepressor
    Names
    BCL-6 interacting corepressor
    BCL6 co-repressor

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      39882522..40011694 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015127207.2 → XP_014982693.2  BCL-6 corepressor isoform X4

      UniProtKB/TrEMBL
      F7BB89, G7NT04
      Conserved Domains (5) summary
      cd14261
      Location:1598 → 1712
      PUFD; PCGF Ub-like fold discriminator of BCOR
      pfam05109
      Location:257 → 673
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:1429 → 1460
      ANK; ANK repeat [structural motif]
      pfam15808
      Location:1168 → 1380
      BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
      pfam12796
      Location:1433 → 1524
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_015127203.2 → XP_014982689.2  BCL-6 corepressor isoform X1

      UniProtKB/TrEMBL
      G7NT04
      Conserved Domains (5) summary
      cd14261
      Location:1632 → 1746
      PUFD; PCGF Ub-like fold discriminator of BCOR
      pfam05109
      Location:257 → 673
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:1463 → 1494
      ANK; ANK repeat [structural motif]
      pfam15808
      Location:1202 → 1414
      BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
      pfam12796
      Location:1467 → 1558
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_028842387.1 → XP_028698220.1  BCL-6 corepressor isoform X1

      UniProtKB/TrEMBL
      G7NT04
      Conserved Domains (5) summary
      cd14261
      Location:1632 → 1746
      PUFD; PCGF Ub-like fold discriminator of BCOR
      pfam05109
      Location:257 → 673
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:1463 → 1494
      ANK; ANK repeat [structural motif]
      pfam15808
      Location:1202 → 1414
      BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
      pfam12796
      Location:1467 → 1558
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_028842388.1 → XP_028698221.1  BCL-6 corepressor isoform X1

      UniProtKB/TrEMBL
      G7NT04
      Conserved Domains (5) summary
      cd14261
      Location:1632 → 1746
      PUFD; PCGF Ub-like fold discriminator of BCOR
      pfam05109
      Location:257 → 673
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:1463 → 1494
      ANK; ANK repeat [structural motif]
      pfam15808
      Location:1202 → 1414
      BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
      pfam12796
      Location:1467 → 1558
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_028842389.1 → XP_028698222.1  BCL-6 corepressor isoform X1

      UniProtKB/TrEMBL
      G7NT04
      Conserved Domains (5) summary
      cd14261
      Location:1632 → 1746
      PUFD; PCGF Ub-like fold discriminator of BCOR
      pfam05109
      Location:257 → 673
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:1463 → 1494
      ANK; ANK repeat [structural motif]
      pfam15808
      Location:1202 → 1414
      BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
      pfam12796
      Location:1467 → 1558
      Ank_2; Ankyrin repeats (3 copies)

    6. XM_015127204.2 → XP_014982690.2  BCL-6 corepressor isoform X2

      UniProtKB/TrEMBL
      G7NT04
      Conserved Domains (5) summary
      cd14261
      Location:1614 → 1728
      PUFD; PCGF Ub-like fold discriminator of BCOR
      pfam05109
      Location:257 → 673
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:1445 → 1476
      ANK; ANK repeat [structural motif]
      pfam15808
      Location:1184 → 1396
      BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
      pfam12796
      Location:1449 → 1540
      Ank_2; Ankyrin repeats (3 copies)

    7. XM_015127202.2 → XP_014982688.2  BCL-6 corepressor isoform X1

      UniProtKB/TrEMBL
      G7NT04
      Conserved Domains (5) summary
      cd14261
      Location:1632 → 1746
      PUFD; PCGF Ub-like fold discriminator of BCOR
      pfam05109
      Location:257 → 673
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:1463 → 1494
      ANK; ANK repeat [structural motif]
      pfam15808
      Location:1202 → 1414
      BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
      pfam12796
      Location:1467 → 1558
      Ank_2; Ankyrin repeats (3 copies)

    8. XM_015127208.2 → XP_014982694.2  BCL-6 corepressor isoform X5

      UniProtKB/TrEMBL
      G7NT04
      Conserved Domains (5) summary
      cd14261
      Location:1580 → 1694
      PUFD; PCGF Ub-like fold discriminator of BCOR
      pfam05109
      Location:257 → 673
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:1411 → 1442
      ANK; ANK repeat [structural motif]
      pfam15808
      Location:1150 → 1362
      BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
      pfam12796
      Location:1415 → 1506
      Ank_2; Ankyrin repeats (3 copies)

    9. XM_015127206.2 → XP_014982692.2  BCL-6 corepressor isoform X4

      UniProtKB/TrEMBL
      F7BB89, G7NT04
      Related
      ENSMMUP00000006996.4, ENSMMUT00000007445.4
      Conserved Domains (5) summary
      cd14261
      Location:1598 → 1712
      PUFD; PCGF Ub-like fold discriminator of BCOR
      pfam05109
      Location:257 → 673
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:1429 → 1460
      ANK; ANK repeat [structural motif]
      pfam15808
      Location:1168 → 1380
      BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
      pfam12796
      Location:1433 → 1524
      Ank_2; Ankyrin repeats (3 copies)

    10. XM_015127212.2 → XP_014982698.2  BCL-6 corepressor isoform X7

      UniProtKB/TrEMBL
      A0A1D5Q573, A0A1D5RKJ4, G7NT04
      Related
      ENSMMUP00000060838.2, ENSMMUT00000056717.2
      Conserved Domains (5) summary
      cd14261
      Location:1580 → 1694
      PUFD; PCGF Ub-like fold discriminator of BCOR
      pfam05109
      Location:257 → 673
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:1411 → 1442
      ANK; ANK repeat [structural motif]
      pfam15808
      Location:1150 → 1362
      BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
      pfam12796
      Location:1415 → 1506
      Ank_2; Ankyrin repeats (3 copies)

    11. XM_015127210.2 → XP_014982696.2  BCL-6 corepressor isoform X6

      UniProtKB/TrEMBL
      F7BBA4, G7NT04
      Related
      ENSMMUP00000006995.4, ENSMMUT00000007444.4
      Conserved Domains (5) summary
      cd14261
      Location:1598 → 1712
      PUFD; PCGF Ub-like fold discriminator of BCOR
      pfam05109
      Location:257 → 673
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:1429 → 1460
      ANK; ANK repeat [structural motif]
      pfam15808
      Location:1168 → 1380
      BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
      pfam12796
      Location:1433 → 1524
      Ank_2; Ankyrin repeats (3 copies)

    12. XM_015127205.2 → XP_014982691.2  BCL-6 corepressor isoform X3

      UniProtKB/TrEMBL
      G7NT04
      Conserved Domains (5) summary
      cd14261
      Location:1632 → 1746
      PUFD; PCGF Ub-like fold discriminator of BCOR
      pfam05109
      Location:257 → 673
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:1463 → 1494
      ANK; ANK repeat [structural motif]
      pfam15808
      Location:1202 → 1414
      BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
      pfam12796
      Location:1467 → 1558
      Ank_2; Ankyrin repeats (3 copies)

    13. XM_015127211.2 → XP_014982697.2  BCL-6 corepressor isoform X7

      UniProtKB/TrEMBL
      A0A1D5Q573, A0A1D5RKJ4, G7NT04
      Related
      ENSMMUP00000076669.1, ENSMMUT00000089681.1
      Conserved Domains (5) summary
      cd14261
      Location:1580 → 1694
      PUFD; PCGF Ub-like fold discriminator of BCOR
      pfam05109
      Location:257 → 673
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:1411 → 1442
      ANK; ANK repeat [structural motif]
      pfam15808
      Location:1150 → 1362
      BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
      pfam12796
      Location:1415 → 1506
      Ank_2; Ankyrin repeats (3 copies)

    14. XM_015127209.2 → XP_014982695.2  BCL-6 corepressor isoform X6

      UniProtKB/TrEMBL
      F7BBA4, G7NT04
      Conserved Domains (5) summary
      cd14261
      Location:1598 → 1712
      PUFD; PCGF Ub-like fold discriminator of BCOR
      pfam05109
      Location:257 → 673
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:1429 → 1460
      ANK; ANK repeat [structural motif]
      pfam15808
      Location:1168 → 1380
      BCOR; BCL-6 co-repressor, non-ankyrin-repeat region
      pfam12796
      Location:1433 → 1524
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.