SYNRG synergin gamma [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: SYNRGprovided by VGNC
Official Full Name: synergin gammaprovided by VGNC
Primary source: VGNC:VGNC:78262
See related: Ensembl:ENSMMUG00000002976
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 16

Exon count:: 25

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	16	NC_041769.1 (33490978..33585637)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	16	NC_027908.1 (43542891..43635536, complement)

Chromosome 16 - NC_041769.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Markers

RH48776 (e-PCR)
- UniSTS:15720

NIB35 (e-PCR)
- UniSTS:21616

Cda1ec02 (e-PCR)
- UniSTS:33478

RH103454 (e-PCR)
- UniSTS:97779

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of clathrin coat of trans-Golgi network vesicle	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: synergin gamma

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001266089.2 → NP_001253018.1 synergin gamma

See identical proteins and their annotated locations for NP_001253018.1

Status: PROVISIONAL

Source sequence(s)

JU474181

UniProtKB/TrEMBL

F7H9J3, H9Z4W9

Related

ENSMMUP00000034678.3, ENSMMUT00000041653.3

Conserved Domains (3) summary

cd00052
Location:225 → 289

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

cl00928
Location:116 → 150

dsDNA_bind; Double-stranded DNA-binding domain

cl09607
Location:231 → 379

Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

NC_041769.1 Reference Mmul_10 Primary Assembly

Range

33490978..33585637

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015119432.2 → XP_014974918.2 synergin gamma isoform X1

UniProtKB/TrEMBL

A0A1D5RGZ9

Related

ENSMMUP00000059593.2, ENSMMUT00000054247.2

Conserved Domains (4) summary

cd00052
Location:404 → 468

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

pfam09606
Location:32 → 270

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cl09607
Location:410 → 558

Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

pfam03154
Location:181 → 396

Atrophin-1; Atrophin-1 family
XM_015119434.2 → XP_014974920.2 synergin gamma isoform X3

UniProtKB/TrEMBL

A0A1D5RGZ9

Conserved Domains (4) summary

cd00052
Location:404 → 468

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

pfam09606
Location:32 → 270

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cl09607
Location:410 → 558

Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

pfam03154
Location:181 → 396

Atrophin-1; Atrophin-1 family
XM_015119438.2 → XP_014974924.2 synergin gamma isoform X7

UniProtKB/TrEMBL

A0A1D5RGZ9

Conserved Domains (4) summary

cd00052
Location:404 → 468

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

pfam09606
Location:32 → 270

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cl09607
Location:410 → 558

Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

pfam03154
Location:181 → 396

Atrophin-1; Atrophin-1 family
XM_015119435.2 → XP_014974921.2 synergin gamma isoform X5

UniProtKB/TrEMBL

A0A1D5RGZ9

Conserved Domains (4) summary

cd00052
Location:404 → 468

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

pfam09606
Location:32 → 270

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cl09607
Location:410 → 558

Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

pfam03154
Location:181 → 396

Atrophin-1; Atrophin-1 family
XM_015119437.2 → XP_014974923.2 synergin gamma isoform X6

UniProtKB/TrEMBL

A0A1D5RGZ9

Conserved Domains (4) summary

cd00052
Location:404 → 468

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

pfam09606
Location:32 → 270

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cl09607
Location:410 → 558

Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

pfam03154
Location:181 → 396

Atrophin-1; Atrophin-1 family
XM_015119440.2 → XP_014974926.2 synergin gamma isoform X8

UniProtKB/TrEMBL

F7GXT0

Conserved Domains (3) summary

cd00052
Location:326 → 390

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

pfam09606
Location:32 → 314

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cl09607
Location:332 → 480

Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits
XM_015119443.2 → XP_014974929.2 synergin gamma isoform X10

UniProtKB/TrEMBL

F7GW55, H9FPG0

Related

ENSMMUP00000003980.4, ENSMMUT00000004219.4

Conserved Domains (5) summary

cd00052
Location:303 → 367

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

pfam02029
Location:116 → 203

Caldesmon

pfam09606
Location:32 → 131

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cl09607
Location:309 → 457

Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

pfam15346
Location:116 → 149

ARGLU; Arginine and glutamate-rich 1
XM_015119449.2 → XP_014974935.2 synergin gamma isoform X14

UniProtKB/TrEMBL

H9Z4X0

Conserved Domains (4) summary

cd00052
Location:225 → 289

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

pfam09606
Location:32 → 131

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cl09607
Location:231 → 379

Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

pfam15346
Location:116 → 149

ARGLU; Arginine and glutamate-rich 1
XM_015119446.2 → XP_014974932.2 synergin gamma isoform X12

UniProtKB/TrEMBL

H9FPG3

Related

ENSMMUP00000003979.4, ENSMMUT00000004218.4

Conserved Domains (4) summary

cd00052
Location:225 → 289

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

pfam09606
Location:32 → 131

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cl09607
Location:231 → 379

Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

pfam15346
Location:116 → 149

ARGLU; Arginine and glutamate-rich 1
XM_015119447.2 → XP_014974933.2 synergin gamma isoform X13

UniProtKB/TrEMBL

H9Z4X0

Conserved Domains (4) summary

cd00052
Location:225 → 289

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

pfam09606
Location:32 → 131

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cl09607
Location:231 → 379

Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

pfam15346
Location:116 → 149

ARGLU; Arginine and glutamate-rich 1
XM_015119436.2 → XP_014974922.2 synergin gamma isoform X4

UniProtKB/TrEMBL

A0A1D5RGZ9

Conserved Domains (4) summary

cd00052
Location:404 → 468

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

pfam09606
Location:32 → 270

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cl09607
Location:410 → 558

Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

pfam03154
Location:181 → 396

Atrophin-1; Atrophin-1 family
XM_015119433.2 → XP_014974919.2 synergin gamma isoform X2

UniProtKB/TrEMBL

A0A1D5RGZ9

Conserved Domains (5) summary

cd00052
Location:403 → 467

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

pfam09606
Location:30 → 269

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

cl09607
Location:409 → 557

Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

pfam03154
Location:180 → 395

Atrophin-1; Atrophin-1 family

pfam15346
Location:115 → 148

ARGLU; Arginine and glutamate-rich 1
XM_015119445.2 → XP_014974931.2 synergin gamma isoform X11

UniProtKB/TrEMBL

F7H9J3

Related

ENSMMUP00000062868.1, ENSMMUT00000097083.1

Conserved Domains (3) summary

cd00052
Location:224 → 288

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

pfam09606
Location:32 → 337

Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

pfam15346
Location:115 → 148

ARGLU; Arginine and glutamate-rich 1
XM_015119442.2 → XP_014974928.2 synergin gamma isoform X9

UniProtKB/TrEMBL

A0A1D5RGZ9

Conserved Domains (4) summary

cd00052
Location:320 → 384

EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

cl09607
Location:326 → 474

Gly_reductase; Glycine/sarcosine/betaine reductase component B subunits

pfam03154
Location:97 → 312

Atrophin-1; Atrophin-1 family

pfam15346
Location:32 → 65

ARGLU; Arginine and glutamate-rich 1