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    ATG4C autophagy related 4C cysteine peptidase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695606, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ATG4Cprovided by VGNC
    Official Full Name
    autophagy related 4C cysteine peptidaseprovided by VGNC
    Primary source
    VGNC:VGNC:70079
    See related
    Ensembl:ENSMMUG00000000386
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ATG4C in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (161550223..161669480, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (62468338..62550701)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein SA-like Neighboring gene uncharacterized LOC106998987 Neighboring gene 60S ribosomal protein L13a pseudogene Neighboring gene dedicator of cytokinesis 7 Neighboring gene angiopoietin like 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-phosphatidylethanolamide deconjugating activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cysteine protease ATG4C
    Names
    ATG4 autophagy related 4 homolog C
    NP_001244816.1
    XP_028684130.1
    XP_028684163.1
    XP_028684205.1
    XP_028684242.1
    XP_028684269.1
    XP_028684291.1
    XP_028684333.1
    XP_028684356.1
    XP_028684386.1
    XP_028684418.1
    XP_028684452.1
    XP_028684487.1
    XP_028684505.1
    XP_028684544.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257887.1 → NP_001244816.1  cysteine protease ATG4C

      See identical proteins and their annotated locations for NP_001244816.1

      Status: PROVISIONAL

      Source sequence(s)
      JU322374
      UniProtKB/TrEMBL
      G7MHG7, H9EUS1
      Conserved Domains (1) summary
      pfam03416
      Location:77 → 395
      Peptidase_C54; Peptidase family C54

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      161550223..161669480 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028828553.1 → XP_028684386.1  cysteine protease ATG4C isoform X2

      UniProtKB/TrEMBL
      F6X5Z7, G7MHG7
      Related
      ENSMMUP00000000514.4, ENSMMUT00000000560.4
      Conserved Domains (1) summary
      pfam03416
      Location:76 → 395
      Peptidase_C54; Peptidase family C54

    2. XM_028828619.1 → XP_028684452.1  cysteine protease ATG4C isoform X3

      UniProtKB/TrEMBL
      G7MHG7, H9EUS1
      Conserved Domains (1) summary
      pfam03416
      Location:77 → 395
      Peptidase_C54; Peptidase family C54

    3. XM_028828585.1 → XP_028684418.1  cysteine protease ATG4C isoform X3

      UniProtKB/TrEMBL
      G7MHG7, H9EUS1
      Related
      ENSMMUP00000065980.1, ENSMMUT00000101576.1
      Conserved Domains (1) summary
      pfam03416
      Location:77 → 395
      Peptidase_C54; Peptidase family C54

    4. XM_028828654.1 → XP_028684487.1  cysteine protease ATG4C isoform X3

      UniProtKB/TrEMBL
      G7MHG7, H9EUS1
      Related
      ENSMMUP00000079068.1, ENSMMUT00000108940.1
      Conserved Domains (1) summary
      pfam03416
      Location:77 → 395
      Peptidase_C54; Peptidase family C54

    5. XM_028828672.1 → XP_028684505.1  cysteine protease ATG4C isoform X4

      UniProtKB/TrEMBL
      G7MHG7
      Conserved Domains (1) summary
      pfam03416
      Location:76 → 395
      Peptidase_C54; Peptidase family C54

    6. XM_028828523.1 → XP_028684356.1  cysteine protease ATG4C isoform X1

      UniProtKB/TrEMBL
      G7MHG7
      Conserved Domains (1) summary
      pfam03416
      Location:77 → 395
      Peptidase_C54; Peptidase family C54

    7. XM_028828330.1 → XP_028684163.1  cysteine protease ATG4C isoform X1

      UniProtKB/TrEMBL
      G7MHG7
      Conserved Domains (1) summary
      pfam03416
      Location:77 → 395
      Peptidase_C54; Peptidase family C54

    8. XM_028828297.1 → XP_028684130.1  cysteine protease ATG4C isoform X1

      UniProtKB/TrEMBL
      G7MHG7
      Conserved Domains (1) summary
      pfam03416
      Location:77 → 395
      Peptidase_C54; Peptidase family C54

    9. XM_028828409.1 → XP_028684242.1  cysteine protease ATG4C isoform X1

      UniProtKB/TrEMBL
      G7MHG7
      Conserved Domains (1) summary
      pfam03416
      Location:77 → 395
      Peptidase_C54; Peptidase family C54

    10. XM_028828436.1 → XP_028684269.1  cysteine protease ATG4C isoform X1

      UniProtKB/TrEMBL
      G7MHG7
      Conserved Domains (1) summary
      pfam03416
      Location:77 → 395
      Peptidase_C54; Peptidase family C54

    11. XM_028828458.1 → XP_028684291.1  cysteine protease ATG4C isoform X1

      UniProtKB/TrEMBL
      G7MHG7
      Conserved Domains (1) summary
      pfam03416
      Location:77 → 395
      Peptidase_C54; Peptidase family C54

    12. XM_028828372.1 → XP_028684205.1  cysteine protease ATG4C isoform X1

      UniProtKB/TrEMBL
      G7MHG7
      Conserved Domains (1) summary
      pfam03416
      Location:77 → 395
      Peptidase_C54; Peptidase family C54

    13. XM_028828500.1 → XP_028684333.1  cysteine protease ATG4C isoform X1

      UniProtKB/TrEMBL
      G7MHG7
      Conserved Domains (1) summary
      pfam03416
      Location:77 → 395
      Peptidase_C54; Peptidase family C54

    14. XM_028828711.1 → XP_028684544.1  cysteine protease ATG4C isoform X5

      UniProtKB/TrEMBL
      G7MHG7
      Conserved Domains (1) summary
      pfam03416
      Location:76 → 363
      Peptidase_C54; Peptidase family C54
    Nucleotide Protein
    Heading Accession and Version

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