U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PTBP3 polypyrimidine tract binding protein 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711210, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PTBP3provided by VGNC
    Official Full Name
    polypyrimidine tract binding protein 3provided by VGNC
    Primary source
    VGNC:VGNC:76244
    See related
    Ensembl:ENSMMUG00000000464
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PTBP3 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (30491285..30607111)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (27060658..27177466)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106993647 Neighboring gene 60S ribosomal protein L38 pseudogene Neighboring gene hydroxysteroid dehydrogenase like 2 Neighboring gene 60S ribosomal protein L29 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene sushi domain containing 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    polypyrimidine tract-binding protein 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      30491285..30607111
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015117069.2 → XP_014972555.1  polypyrimidine tract-binding protein 3 isoform X9

      UniProtKB/TrEMBL
      H9FCN9
      Conserved Domains (1) summary
      TIGR01649
      Location:1 → 457
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    2. XM_015117062.2 → XP_014972548.1  polypyrimidine tract-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QCT1, F6YQQ9
      Related
      ENSMMUP00000000635.4, ENSMMUT00000000686.4
      Conserved Domains (1) summary
      TIGR01649
      Location:60 → 555
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    3. XM_015117063.2 → XP_014972549.1  polypyrimidine tract-binding protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QCT1
      Conserved Domains (1) summary
      TIGR01649
      Location:57 → 552
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    4. XM_028834983.1 → XP_028690816.1  polypyrimidine tract-binding protein 3 isoform X11

      UniProtKB/TrEMBL
      A0A1D5QCT1
      Conserved Domains (1) summary
      TIGR01649
      Location:29 → 481
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    5. XM_015117071.2 → XP_014972557.1  polypyrimidine tract-binding protein 3 isoform X5

      UniProtKB/TrEMBL
      A0A5F8A6V6, A0A663DA32, A0A8J8XYG6, F6YQS8, G7NEH9
      Related
      ENSMMUP00000072649.1, ENSMMUT00000106699.1
      Conserved Domains (1) summary
      TIGR01649
      Location:29 → 524
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    6. XM_015117066.2 → XP_014972552.1  polypyrimidine tract-binding protein 3 isoform X6

      UniProtKB/TrEMBL
      A0A663DA32, A0A8J8XYG6, F6YQS8, G7NEH9
      Related
      ENSMMUP00000054767.2, ENSMMUT00000074276.2
      Conserved Domains (1) summary
      TIGR01649
      Location:26 → 521
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    7. XM_028834978.1 → XP_028690811.1  polypyrimidine tract-binding protein 3 isoform X4

      UniProtKB/TrEMBL
      A0A663DA32, A0A8J8XYG6, F6YQS8, G7NEH9
      Conserved Domains (1) summary
      TIGR01649
      Location:47 → 542
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    8. XM_015117068.2 → XP_014972554.1  polypyrimidine tract-binding protein 3 isoform X6

      UniProtKB/TrEMBL
      A0A663DA32, A0A8J8XYG6, F6YQS8, G7NEH9
      Related
      ENSMMUP00000000633.4, ENSMMUT00000000684.4
      Conserved Domains (1) summary
      TIGR01649
      Location:26 → 521
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    9. XM_028834977.1 → XP_028690810.1  polypyrimidine tract-binding protein 3 isoform X3

      UniProtKB/TrEMBL
      A0A663DA32, A0A8J8XYG6, F6YQS8, G7NEH9
      Conserved Domains (1) summary
      TIGR01649
      Location:54 → 549
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    10. XM_015117065.2 → XP_014972551.1  polypyrimidine tract-binding protein 3 isoform X5

      UniProtKB/TrEMBL
      A0A5F8A6V6, A0A663DA32, A0A8J8XYG6, F6YQS8, G7NEH9
      Conserved Domains (1) summary
      TIGR01649
      Location:29 → 524
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    11. XM_028834979.1 → XP_028690812.1  polypyrimidine tract-binding protein 3 isoform X5

      UniProtKB/TrEMBL
      A0A5F8A6V6, A0A663DA32, A0A8J8XYG6, F6YQS8, G7NEH9
      Conserved Domains (1) summary
      TIGR01649
      Location:29 → 524
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    12. XM_015117070.2 → XP_014972556.1  polypyrimidine tract-binding protein 3 isoform X10

      UniProtKB/TrEMBL
      H9FCN9
      Conserved Domains (1) summary
      TIGR01649
      Location:1 → 452
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    13. XM_028834982.1 → XP_028690815.1  polypyrimidine tract-binding protein 3 isoform X8

      UniProtKB/TrEMBL
      H9FCN9
      Conserved Domains (1) summary
      TIGR01649
      Location:1 → 463
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    14. XM_028834981.1 → XP_028690814.1  polypyrimidine tract-binding protein 3 isoform X8

      UniProtKB/TrEMBL
      H9FCN9
      Conserved Domains (1) summary
      TIGR01649
      Location:1 → 463
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    15. XM_028834980.1 → XP_028690813.1  polypyrimidine tract-binding protein 3 isoform X7

      UniProtKB/TrEMBL
      A0A663DA32, A0A8J8XYG6, F6YQS8, G7NEH9
      Conserved Domains (1) summary
      TIGR01649
      Location:24 → 519
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.