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    SNX6 sorting nexin 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693626, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SNX6provided by VGNC
    Official Full Name
    sorting nexin 6provided by VGNC
    Primary source
    VGNC:VGNC:104700
    See related
    Ensembl:ENSMMUG00000012576
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SNX6 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (96630516..96703410, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (95961015..95994607, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene U1 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA aspartic acid (anticodon GUC)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dynactin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      96630516..96703410 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028851488.1 → XP_028707321.1  sorting nexin-6 isoform X2

      UniProtKB/TrEMBL
      A0A1D5RKF5, F7FEN7
      Related
      ENSMMUP00000016504.4, ENSMMUT00000017624.4
      Conserved Domains (2) summary
      cd07292
      Location:42 → 182
      PX_SNX6; The phosphoinositide binding Phox Homology domain of Sorting Nexin 6
      cd07662
      Location:198 → 415
      BAR_SNX6; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 6

    2. XM_028851487.1 → XP_028707320.1  sorting nexin-6 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RKF5
      Related
      ENSMMUP00000054474.2, ENSMMUT00000068084.2
      Conserved Domains (2) summary
      cd07662
      Location:161 → 378
      BAR_SNX6; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 6
      cl02563
      Location:42 → 145
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
    Nucleotide Protein
    Heading Accession and Version

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