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    COL10A1 collagen type X alpha 1 chain [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716223, updated on 17-Aug-2024

    Summary

    Official Symbol
    COL10A1provided by VGNC
    Official Full Name
    collagen type X alpha 1 chainprovided by VGNC
    Primary source
    VGNC:VGNC:104370
    See related
    Ensembl:ENSMMUG00000063074
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
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    Genomic context

    See COL10A1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (19699478..19706652, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (151692100..151699274)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene triosephosphate isomerase-like Neighboring gene fyn related Src family tyrosine kinase Neighboring gene 60S ribosome subunit biogenesis protein NIP7 homolog pseudogene Neighboring gene 5'-nucleotidase domain containing 1 Neighboring gene TSPY like 4

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194546.1NP_001181475.1  collagen alpha-1(X) chain precursor

      See identical proteins and their annotated locations for NP_001181475.1

      Status: INFERRED

      Source sequence(s)
      QNVO02000336
      UniProtKB/TrEMBL
      A0A5F7ZDT9, G7MQP5
      Related
      ENSMMUP00000063345.1, ENSMMUT00000094305.1
      Conserved Domains (2) summary
      smart00110
      Location:545680
      C1Q; Complement component C1q domain
      pfam01391
      Location:326383
      Collagen; Collagen triple helix repeat (20 copies)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      19699478..19706652 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)