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    PRICKLE1 prickle planar cell polarity protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701864, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PRICKLE1provided by VGNC
    Official Full Name
    prickle planar cell polarity protein 1provided by VGNC
    Primary source
    VGNC:VGNC:76271
    Locus tag
    EGK_03538
    See related
    Ensembl:ENSMMUG00000021733
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PRICKLE1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (41860985..41986261, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (40404941..40532825, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene periphilin 1 Neighboring gene U6 spliceosomal RNA Neighboring gene FMR1 autosomal homolog 1 pseudogene Neighboring gene 60S ribosomal protein L12 pseudogene Neighboring gene CDGSH iron-sulfur domain-containing protein 1 pseudogene Neighboring gene uncharacterized LOC107000851

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    prickle-like protein 1
    Names
    REST/NRSF-interacting LIM domain protein 1
    prickle-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      41860985..41986261 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028829410.1 → XP_028685243.1  prickle-like protein 1 isoform X2

      UniProtKB/TrEMBL
      F7E2K2, H9EU29
      Conserved Domains (4) summary
      cd09418
      Location:189 → 244
      LIM2_Prickle; The second LIM domain of Prickle
      cd09420
      Location:249 → 307
      LIM3_Prickle; The third LIM domain of Prickle
      cd09483
      Location:126 → 184
      LIM1_Prickle_1; The first LIM domain of Prickle 1
      cd09827
      Location:22 → 118
      PET_Prickle; The PET domain of Prickle

    2. XM_002798535.3 → XP_002798581.1  prickle-like protein 1 isoform X2

      See identical proteins and their annotated locations for XP_002798581.1

      UniProtKB/TrEMBL
      F7E2K2, H9EU29
      Conserved Domains (4) summary
      cd09418
      Location:189 → 244
      LIM2_Prickle; The second LIM domain of Prickle
      cd09420
      Location:249 → 307
      LIM3_Prickle; The third LIM domain of Prickle
      cd09483
      Location:126 → 184
      LIM1_Prickle_1; The first LIM domain of Prickle 1
      cd09827
      Location:22 → 118
      PET_Prickle; The PET domain of Prickle

    3. XM_015151488.2 → XP_015006974.1  prickle-like protein 1 isoform X1

      UniProtKB/TrEMBL
      F7HTJ1, H9EU29
      Related
      ENSMMUP00000039937.3, ENSMMUT00000046905.3
      Conserved Domains (4) summary
      cd09418
      Location:206 → 261
      LIM2_Prickle; The second LIM domain of Prickle
      cd09420
      Location:266 → 324
      LIM3_Prickle; The third LIM domain of Prickle
      cd09483
      Location:143 → 201
      LIM1_Prickle_1; The first LIM domain of Prickle 1
      cd09827
      Location:39 → 135
      PET_Prickle; The PET domain of Prickle

    4. XM_015151489.2 → XP_015006975.1  prickle-like protein 1 isoform X2

      UniProtKB/TrEMBL
      F7E2K2, H9EU29
      Conserved Domains (4) summary
      cd09418
      Location:189 → 244
      LIM2_Prickle; The second LIM domain of Prickle
      cd09420
      Location:249 → 307
      LIM3_Prickle; The third LIM domain of Prickle
      cd09483
      Location:126 → 184
      LIM1_Prickle_1; The first LIM domain of Prickle 1
      cd09827
      Location:22 → 118
      PET_Prickle; The PET domain of Prickle
    Nucleotide Protein
    Heading Accession and Version

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