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    PTBP1 polypyrimidine tract binding protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703430, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PTBP1provided by VGNC
    Official Full Name
    polypyrimidine tract binding protein 1provided by VGNC
    Primary source
    VGNC:VGNC:76462
    See related
    Ensembl:ENSMMUG00000016450
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PTBP1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (566082..581439)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (562606..578298)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene paralemmin Neighboring gene mitotic spindle positioning Neighboring gene phospholipid phosphatase related 3 Neighboring gene azurocidin 1 Neighboring gene proteinase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polypyrimidine tract-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      566082..581439
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015122301.2 → XP_014977787.1  polypyrimidine tract-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QCD7, G7NL30, H9FXJ7
      Related
      ENSMMUP00000045706.2, ENSMMUT00000067487.2
      Conserved Domains (1) summary
      TIGR01649
      Location:56 → 556
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    2. XM_015122303.2 → XP_014977789.1  polypyrimidine tract-binding protein 1 isoform X4

      UniProtKB/TrEMBL
      F7GF13, G7NL30, H9FXJ8
      Related
      ENSMMUP00000021616.4, ENSMMUT00000023107.4
      Conserved Domains (1) summary
      TIGR01649
      Location:56 → 530
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    3. XM_015122304.2 → XP_014977790.1  polypyrimidine tract-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      F7GF18, G7NL30
      Related
      ENSMMUP00000021615.4, ENSMMUT00000023106.4
      Conserved Domains (1) summary
      TIGR01649
      Location:26 → 526
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    4. XM_015122300.2 → XP_014977786.1  polypyrimidine tract-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q2N4, G7NL30
      Related
      ENSMMUP00000042296.2, ENSMMUT00000078496.2
      Conserved Domains (1) summary
      TIGR01649
      Location:58 → 558
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    5. XM_015122302.2 → XP_014977788.1  polypyrimidine tract-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      G7NL30
      Conserved Domains (1) summary
      TIGR01649
      Location:58 → 532
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family
    Nucleotide Protein
    Heading Accession and Version

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