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    IGSF11 immunoglobulin superfamily member 11 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713784, updated on 17-Aug-2024

    Summary

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    Official Symbol
    IGSF11provided by VGNC
    Official Full Name
    immunoglobulin superfamily member 11provided by VGNC
    Primary source
    VGNC:VGNC:73608
    Locus tag
    EGK_11315
    See related
    Ensembl:ENSMMUG00000008075
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See IGSF11 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (157147848..157361970)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (40069338..40285112, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676423 Neighboring gene beta-1,4-galactosyltransferase 4 Neighboring gene uroplakin 1B Neighboring gene testis expressed 55 Neighboring gene uncharacterized LOC114676424 Neighboring gene 60S ribosomal protein L12 pseudogene Neighboring gene uncharacterized LOC114676425

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ionotropic glutamate receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell-cell junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    immunoglobulin superfamily member 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257906.1 → NP_001244835.1  immunoglobulin superfamily member 11 precursor

      See identical proteins and their annotated locations for NP_001244835.1

      Status: PROVISIONAL

      Source sequence(s)
      JU322970
      UniProtKB/TrEMBL
      A0A5S6R928, A0A8J8XW83, F7H0Z3, G7MKD3
      Related
      ENSMMUP00000010582.4, ENSMMUT00000011293.4
      Conserved Domains (3) summary
      smart00410
      Location:29 → 124
      IG_like; Immunoglobulin like
      pfam07686
      Location:27 → 141
      V-set; Immunoglobulin V-set domain
      cl11960
      Location:156 → 223
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      157147848..157361970
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028843356.1 → XP_028699189.1  immunoglobulin superfamily member 11 isoform X2

      Conserved Domains (2) summary
      pfam13927
      Location:99 → 160
      Ig_3; Immunoglobulin domain
      cl11960
      Location:8 → 78
      Ig; Immunoglobulin domain

    2. XM_028843355.1 → XP_028699188.1  immunoglobulin superfamily member 11 isoform X1

      Conserved Domains (2) summary
      pfam07686
      Location:27 → 141
      V-set; Immunoglobulin V-set domain
      pfam13927
      Location:158 → 206
      Ig_3; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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