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    TRAPPC6A trafficking protein particle complex subunit 6A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713880, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRAPPC6Aprovided by VGNC
    Official Full Name
    trafficking protein particle complex subunit 6Aprovided by VGNC
    Primary source
    VGNC:VGNC:79374
    See related
    Ensembl:ENSMMUG00000022931
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TRAPPC6A in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (45208982..45225137, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (40479792..40495700, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 37 Neighboring gene eukaryotic translation initiation factor 5A-1-like Neighboring gene NTPase KAP family P-loop domain containing 1 Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 3 Neighboring gene exocyst complex component 3 like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TRAPP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cis-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trafficking protein particle complex subunit 6A
    Names
    trafficking protein particle complex 6A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194478.3 → NP_001181407.2  trafficking protein particle complex subunit 6A

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000225
      UniProtKB/TrEMBL
      A0A5S6R8G2, A0A8J8YPP1, F6U749, G7NMB7
      Related
      ENSMMUP00000030203.4, ENSMMUT00000032280.4
      Conserved Domains (1) summary
      cd14944
      Location:3 → 171
      TRAPPC6A_Trs33; Trs33 subunit of the TRAPP complex

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      45208982..45225137 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002801293.3 → XP_002801339.2  trafficking protein particle complex subunit 6A isoform X1

      UniProtKB/TrEMBL
      H9F5C0
      Conserved Domains (1) summary
      cd14944
      Location:3 → 157
      TRAPPC6A_Trs33; Trs33 subunit of the TRAPP complex

    2. XM_015124121.2 → XP_014979607.2  trafficking protein particle complex subunit 6A isoform X2

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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