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    PELI1 pellino E3 ubiquitin protein ligase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696416, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PELI1provided by VGNC
    Official Full Name
    pellino E3 ubiquitin protein ligase 1provided by VGNC
    Primary source
    VGNC:VGNC:106195
    Locus tag
    EGK_05378
    See related
    Ensembl:ENSMMUG00000059267
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PELI1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (44623390..44690236)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (64966647..65032507, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671954 Neighboring gene 60S ribosomal protein L6 pseudogene Neighboring gene uncharacterized LOC106992986 Neighboring gene VPS54 subunit of GARP complex Neighboring gene UDP-glucose pyrophosphorylase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein K48-linked ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of Toll signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase pellino homolog 1
    Names
    pellino homolog 1
    protein pellino homolog 1
    NP_001247881.1
    XP_028687273.1
    XP_028687274.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260952.1 → NP_001247881.1  E3 ubiquitin-protein ligase pellino homolog 1

      See identical proteins and their annotated locations for NP_001247881.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045492
      UniProtKB/TrEMBL
      A0A8J8YJU9, F7DKJ6, G7NA65
      Related
      ENSMMUP00000072501.1, ENSMMUT00000079856.1
      Conserved Domains (1) summary
      pfam04710
      Location:10 → 418
      Pellino

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      44623390..44690236
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028831440.1 → XP_028687273.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YJU9, F7DKJ6, G7NA65
      Related
      ENSMMUP00000078335.1, ENSMMUT00000102801.1
      Conserved Domains (1) summary
      pfam04710
      Location:10 → 418
      Pellino

    2. XM_028831441.1 → XP_028687274.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YJU9, F7DKJ6, G7NA65
      Conserved Domains (1) summary
      pfam04710
      Location:10 → 418
      Pellino
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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