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    ERI2 ERI1 exoribonuclease family member 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696072, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ERI2provided by VGNC
    Official Full Name
    ERI1 exoribonuclease family member 2provided by VGNC
    Primary source
    VGNC:VGNC:104696
    Locus tag
    EGK_12572
    See related
    Ensembl:ENSMMUG00000016746
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ERI2 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (19521022..19530128, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (19851511..19860025, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase medium chain family member 3 Neighboring gene uncharacterized LOC114674447 Neighboring gene U6 spliceosomal RNA Neighboring gene RNA exonuclease 5 Neighboring gene defective in cullin neddylation 1 domain containing 3 Neighboring gene LYR motif containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3'-5'-RNA exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ERI1 exoribonuclease 2
    XP_014981239.2
    XP_014981240.2
    XP_014981241.2
    XP_014981242.2
    XP_014981243.1
    XP_028697228.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      19521022..19530128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015125754.2 → XP_014981240.2  ERI1 exoribonuclease 2 isoform X2

      UniProtKB/TrEMBL
      F7APV0, G7NPY9
      Related
      ENSMMUP00000022008.2, ENSMMUT00000023525.3
      Conserved Domains (2) summary
      cd06133
      Location:37 → 230
      ERI-1_3'hExo_like; DEDDh 3'-5' exonuclease domain of Caenorhabditis elegans ERI-1, human 3' exonuclease, and similar proteins
      pfam06839
      Location:594 → 642
      zf-GRF; GRF zinc finger

    2. XM_015125756.2 → XP_014981242.2  ERI1 exoribonuclease 2 isoform X3

      UniProtKB/TrEMBL
      G7NPY9
      Conserved Domains (2) summary
      cd06133
      Location:2 → 137
      ERI-1_3'hExo_like; DEDDh 3'-5' exonuclease domain of Caenorhabditis elegans ERI-1, human 3' exonuclease, and similar proteins
      pfam06839
      Location:501 → 549
      zf-GRF; GRF zinc finger

    3. XM_028841395.1 → XP_028697228.1  ERI1 exoribonuclease 2 isoform X3

      UniProtKB/TrEMBL
      G7NPY9
      Conserved Domains (2) summary
      cd06133
      Location:2 → 137
      ERI-1_3'hExo_like; DEDDh 3'-5' exonuclease domain of Caenorhabditis elegans ERI-1, human 3' exonuclease, and similar proteins
      pfam06839
      Location:501 → 549
      zf-GRF; GRF zinc finger

    4. XM_015125755.2 → XP_014981241.2  ERI1 exoribonuclease 2 isoform X3

      UniProtKB/TrEMBL
      G7NPY9
      Conserved Domains (2) summary
      cd06133
      Location:2 → 137
      ERI-1_3'hExo_like; DEDDh 3'-5' exonuclease domain of Caenorhabditis elegans ERI-1, human 3' exonuclease, and similar proteins
      pfam06839
      Location:501 → 549
      zf-GRF; GRF zinc finger

    5. XM_015125753.2 → XP_014981239.2  ERI1 exoribonuclease 2 isoform X1

      UniProtKB/TrEMBL
      G7NPY9
      Conserved Domains (2) summary
      cd06133
      Location:43 → 236
      ERI-1_3'hExo_like; DEDDh 3'-5' exonuclease domain of Caenorhabditis elegans ERI-1, human 3' exonuclease, and similar proteins
      pfam06839
      Location:600 → 648
      zf-GRF; GRF zinc finger

    6. XM_015125757.2 → XP_014981243.1  ERI1 exoribonuclease 2 isoform X4

      Conserved Domains (1) summary
      cd06133
      Location:37 → 230
      ERI-1_3'hExo_like; DEDDh 3'-5' exonuclease domain of Caenorhabditis elegans ERI-1, human 3' exonuclease, and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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