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    CPSF1 cleavage and polyadenylation specific factor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702082, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CPSF1provided by VGNC
    Official Full Name
    cleavage and polyadenylation specific factor 1provided by VGNC
    Primary source
    VGNC:VGNC:71472
    See related
    Ensembl:ENSMMUG00000007380
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CPSF1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    38
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (144678941..144695895, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (143637811..143655383, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 249 Neighboring gene F-box and leucine rich repeat protein 6 Neighboring gene solute carrier family 52 member 2 Neighboring gene aarF domain containing kinase 5 Neighboring gene microRNA mir-939 Neighboring gene microRNA mir-1234 Neighboring gene endogenous retrovirus group K member 6 Env polyprotein-like Neighboring gene uncharacterized LOC114680370 Neighboring gene solute carrier family 39 member 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mRNA cleavage and polyadenylation specificity factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cleavage and polyadenylation specificity factor subunit 1
    Names
    cleavage and polyadenylation specific factor 1, 160kDa
    NP_001254722.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001267793.1 → NP_001254722.1  cleavage and polyadenylation specificity factor subunit 1

      See identical proteins and their annotated locations for NP_001254722.1

      Status: PROVISIONAL

      Source sequence(s)
      JU475327
      UniProtKB/TrEMBL
      F7E0P7, H9FTK0, I0FR72
      Related
      ENSMMUT00000010324.4
      Conserved Domains (1) summary
      COG5161
      Location:1 → 1436
      SFT1; Pre-mRNA cleavage and polyadenylation specificity factor [RNA processing and modification]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      144678941..144695895 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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