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    AUP1 AUP1 lipid droplet regulating VLDL assembly factor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710020, updated on 17-Aug-2024

    Summary

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    Official Symbol
    AUP1provided by VGNC
    Official Full Name
    AUP1 lipid droplet regulating VLDL assembly factorprovided by VGNC
    Primary source
    VGNC:VGNC:70196
    See related
    Ensembl:ENSMMUG00000002131
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    HTRA2
    Orthologs
    human mouse all
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    Genomic context

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    See AUP1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (34286577..34289824)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (75545397..75548633, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene meiosis 1 associated protein Neighboring gene torsin-1B-like Neighboring gene docking protein 1 Neighboring gene lysyl oxidase like 3 Neighboring gene HtrA serine peptidase 2 Neighboring gene DEAQ-box RNA dependent ATPase 1 Neighboring gene T cell leukemia homeobox 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ancient ubiquitous protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      34286577..34289824
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112709.2 → XP_014968195.1  ancient ubiquitous protein 1 isoform X5

      UniProtKB/TrEMBL
      F6UNX6, G7NAF0, H9FWC7
      Related
      ENSMMUP00000002842.4, ENSMMUT00000003010.4
      Conserved Domains (2) summary
      cd14420
      Location:296 → 340
      CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
      cl17185
      Location:66 → 264
      LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis

    2. XM_015112705.2 → XP_014968191.2  ancient ubiquitous protein 1 isoform X1

      UniProtKB/TrEMBL
      G7NAF0
      Conserved Domains (2) summary
      cd14420
      Location:360 → 404
      CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
      cl17185
      Location:66 → 328
      LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis

    3. XM_015112707.2 → XP_014968193.2  ancient ubiquitous protein 1 isoform X3

      UniProtKB/TrEMBL
      G7NAF0
      Conserved Domains (2) summary
      cd14420
      Location:360 → 404
      CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
      cl17185
      Location:66 → 328
      LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis

    4. XM_015112706.2 → XP_014968192.1  ancient ubiquitous protein 1 isoform X2

      Conserved Domains (2) summary
      cd14420
      Location:352 → 396
      CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
      cl17185
      Location:122 → 320
      LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis

    5. XM_015112708.2 → XP_014968194.1  ancient ubiquitous protein 1 isoform X4

      UniProtKB/TrEMBL
      G7NAF0
      Conserved Domains (2) summary
      cd14420
      Location:296 → 340
      CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
      cl17185
      Location:66 → 264
      LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis

    RNA

    1. XR_001439187.1 RNA Sequence

    2. XR_001439186.2 RNA Sequence

    3. XR_003722102.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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