U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TAPBP TAP binding protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718235, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TAPBPprovided by VGNC
    Official Full Name
    TAP binding proteinprovided by VGNC
    Primary source
    VGNC:VGNC:78098
    Locus tag
    EGK_14783
    See related
    Ensembl:ENSMMUG00000003875
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TAPBP in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (136191811..136205440)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (34145333..34158387, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene kinesin family member C1 Neighboring gene 60S ribosomal protein L35a pseudogene Neighboring gene death domain associated protein Neighboring gene zinc finger and BTB domain containing 22 Neighboring gene ral guanine nucleotide dissociation stimulator like 2 Neighboring gene prefoldin subunit 6 Neighboring gene WD repeat domain 46

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in antigen processing and presentation of endogenous peptide antigen via MHC class I IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tapasin

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261727.2 → NP_001248656.1  tapasin precursor

      See identical proteins and their annotated locations for NP_001248656.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045304
      UniProtKB/TrEMBL
      F6TWA1, F7H7T7, I0FLP9
      Related
      ENSMMUP00000005171.4, ENSMMUT00000005492.4
      Conserved Domains (2) summary
      cd00096
      Location:292 → 299
      Ig; Ig strand A [structural motif]
      cl11960
      Location:292 → 391
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      136191811..136205440
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028846861.1 → XP_028702694.1  tapasin isoform X1

      UniProtKB/TrEMBL
      F6TWA1
      Conserved Domains (1) summary
      cl11960
      Location:256 → 391
      Ig; Immunoglobulin domain

    2. XM_015136070.2 → XP_014991556.2  tapasin isoform X2

      UniProtKB/TrEMBL
      F6TWA1
      Conserved Domains (1) summary
      cl11960
      Location:256 → 391
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.