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    HR HR lysine demethylase and nuclear receptor corepressor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 574164, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HRprovided by VGNC
    Official Full Name
    HR lysine demethylase and nuclear receptor corepressorprovided by VGNC
    Primary source
    VGNC:VGNC:73518
    See related
    Ensembl:ENSMMUG00000013022
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 8
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (22279151..22302024, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (22010442..22029002, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene FHF complex subunit HOOK interacting protein 2B Neighboring gene nudix hydrolase 18 Neighboring gene receptor accessory protein 4 Neighboring gene leucine rich repeat LGI family member 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone H3K9 demethylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of histone deacetylase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysine-specific demethylase hairless
    Names
    hair growth associated
    hairless homolog
    NP_001028015.1
    XP_015000373.2
    XP_015000374.2
    XP_015000375.2
    XP_015000376.2
    XP_028707932.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001032843.1 → NP_001028015.1  lysine-specific demethylase hairless

      See identical proteins and their annotated locations for NP_001028015.1

      Status: PROVISIONAL

      Source sequence(s)
      AF361864
      UniProtKB/TrEMBL
      G7N0M7, Q8WNL9
      Related
      ENSMMUP00000017100.3, ENSMMUT00000018268.4
      Conserved Domains (2) summary
      cl21464
      Location:1098 → 1138
      cupin_like; Conserved domain found in cupin and related proteins
      cl22851
      Location:596 → 623
      PHD_SF; PHD finger superfamily

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      22279151..22302024 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028852099.1 → XP_028707932.1  lysine-specific demethylase hairless isoform X1

      UniProtKB/TrEMBL
      G7N0M7
      Conserved Domains (2) summary
      cl28890
      Location:597 → 624
      FYVE_like_SF; FYVE domain like superfamily
      cl21464
      Location:1094 → 1139
      cupin_like; Conserved domain found in cupin and related proteins

    2. XM_015144887.2 → XP_015000373.2  lysine-specific demethylase hairless isoform X1

      UniProtKB/TrEMBL
      G7N0M7
      Conserved Domains (2) summary
      cl28890
      Location:597 → 624
      FYVE_like_SF; FYVE domain like superfamily
      cl21464
      Location:1094 → 1139
      cupin_like; Conserved domain found in cupin and related proteins

    3. XM_015144888.2 → XP_015000374.2  lysine-specific demethylase hairless isoform X2

      UniProtKB/TrEMBL
      F7HAD9, G7N0M7
      Conserved Domains (2) summary
      cl28890
      Location:596 → 623
      FYVE_like_SF; FYVE domain like superfamily
      cl21464
      Location:1093 → 1138
      cupin_like; Conserved domain found in cupin and related proteins

    4. XM_015144890.2 → XP_015000376.2  lysine-specific demethylase hairless isoform X4

      UniProtKB/TrEMBL
      I2CXC1
      Related
      ENSMMUP00000017097.3, ENSMMUT00000018265.4
      Conserved Domains (1) summary
      cl28890
      Location:596 → 623
      FYVE_like_SF; FYVE domain like superfamily

    5. XM_015144889.2 → XP_015000375.2  lysine-specific demethylase hairless isoform X3

      UniProtKB/TrEMBL
      I2CXC1
      Related
      ENSMMUP00000069945.1, ENSMMUT00000098960.1
      Conserved Domains (1) summary
      cl28890
      Location:597 → 624
      FYVE_like_SF; FYVE domain like superfamily
    Nucleotide Protein
    Heading Accession and Version

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