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    HMGB3 high mobility group box 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703598, updated on 5-Mar-2024

    Summary

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    Gene symbol
    HMGB3
    Gene description
    high mobility group box 3
    See related
    Ensembl:ENSMMUG00000004633
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See HMGB3 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (146980465..146990079)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (144611792..144623737)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene CD99 molecule like 2 Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L19 pseudogene Neighboring gene G protein-coupled receptor 50

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding, bending IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    high mobility group protein B3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      146980465..146990079
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015128417.2 → XP_014983903.1  high mobility group protein B3 isoform X2

      UniProtKB/TrEMBL
      G7NRY9
      Conserved Domains (2) summary
      pfam00505
      Location:113 → 180
      HMG_box; HMG (high mobility group) box
      pfam09011
      Location:33 → 98
      HMG_box_2; HMG-box domain

    2. XM_001091672.4 → XP_001091672.1  high mobility group protein B3 isoform X3

      See identical proteins and their annotated locations for XP_001091672.1

      UniProtKB/TrEMBL
      F6TE46, G7NRY9
      Related
      ENSMMUP00000006164.1, ENSMMUT00000006553.3
      Conserved Domains (2) summary
      pfam00505
      Location:93 → 160
      HMG_box; HMG (high mobility group) box
      pfam09011
      Location:13 → 78
      HMG_box_2; HMG-box domain

    3. XM_001091441.4 → XP_001091441.1  high mobility group protein B3 isoform X3

      See identical proteins and their annotated locations for XP_001091441.1

      UniProtKB/TrEMBL
      F6TE46, G7NRY9
      Conserved Domains (2) summary
      pfam00505
      Location:93 → 160
      HMG_box; HMG (high mobility group) box
      pfam09011
      Location:13 → 78
      HMG_box_2; HMG-box domain

    4. XM_015128416.2 → XP_014983902.2  high mobility group protein B3 isoform X1

      UniProtKB/TrEMBL
      G7NRY9
      Conserved Domains (2) summary
      pfam00505
      Location:97 → 164
      HMG_box; HMG (high mobility group) box
      pfam09011
      Location:17 → 82
      HMG_box_2; HMG-box domain
    Nucleotide Protein
    Heading Accession and Version

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