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    ORMDL1 ORMDL sphingolipid biosynthesis regulator 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709832, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ORMDL1provided by VGNC
    Official Full Name
    ORMDL sphingolipid biosynthesis regulator 1provided by VGNC
    Primary source
    VGNC:VGNC:75615
    Locus tag
    EGK_04621
    See related
    Ensembl:ENSMMUG00000014316
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ORMDL1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (76947810..76961978, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (77209984..77224068, complement)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene ankyrin and armadillo repeat containing Neighboring gene uncharacterized LOC114671377 Neighboring gene O-sialoglycoprotein endopeptidase like 1 Neighboring gene alpha carbonic anhydrase 8-like Neighboring gene PMS1 homolog 1, mismatch repair system component Neighboring gene glucosamine 6-phosphate N-acetyltransferase pseudogene Neighboring gene protein FAN pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in ceramide metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular sphingolipid homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of ceramide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ORM1-like protein 1
    Names
    ORM1-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266349.1 → NP_001253278.1  ORM1-like protein 1

      See identical proteins and their annotated locations for NP_001253278.1

      Status: PROVISIONAL

      Source sequence(s)
      JU477898
      UniProtKB/TrEMBL
      A0A8J8XL06, F7D5L1, G7N8H9
      Conserved Domains (1) summary
      pfam04061
      Location:11 → 146
      ORMDL; ORMDL family

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      76947810..76961978 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015110498.2 → XP_014965984.1  ORM1-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XL06, F7D5L1, G7N8H9
      Related
      ENSMMUP00000068826.1, ENSMMUT00000088906.1
      Conserved Domains (1) summary
      pfam04061
      Location:11 → 146
      ORMDL; ORMDL family

    2. XM_028830556.1 → XP_028686389.1  ORM1-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XL06, F7D5L1, G7N8H9
      Related
      ENSMMUP00000018799.1, ENSMMUT00000020085.3
      Conserved Domains (1) summary
      pfam04061
      Location:11 → 146
      ORMDL; ORMDL family

    3. XM_015110500.2 → XP_014965986.1  ORM1-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XL06, F7D5L1, G7N8H9
      Conserved Domains (1) summary
      pfam04061
      Location:11 → 146
      ORMDL; ORMDL family

    4. XM_028830555.1 → XP_028686388.1  ORM1-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XL06, F7D5L1, G7N8H9
      Related
      ENSMMUP00000069597.1, ENSMMUT00000084236.1
      Conserved Domains (1) summary
      pfam04061
      Location:11 → 146
      ORMDL; ORMDL family

    5. XM_015110499.2 → XP_014965985.1  ORM1-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XL06, F7D5L1, G7N8H9
      Conserved Domains (1) summary
      pfam04061
      Location:11 → 146
      ORMDL; ORMDL family
    Nucleotide Protein
    Heading Accession and Version

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