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    ATP5PF ATP synthase peripheral stalk subunit F6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708411, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATP5PFprovided by VGNC
    Official Full Name
    ATP synthase peripheral stalk subunit F6provided by VGNC
    Primary source
    VGNC:VGNC:81288
    Locus tag
    EGK_13350
    See related
    Ensembl:ENSMMUG00000008725
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    ATP5J
    Orthologs
    human mouse all
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    Genomic context

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    See ATP5PF in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (20931791..20942485)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (21253095..21263772)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676831 Neighboring gene protein LLP homolog pseudogene Neighboring gene GA binding protein transcription factor subunit alpha Neighboring gene junctional adhesion molecule 2 Neighboring gene mitochondrial ribosomal protein L39 Neighboring gene MIR155 host gene Neighboring gene microRNA mir-155

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables proton transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proton motive force-driven ATP synthesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP synthase-coupling factor 6, mitochondrial
    Names
    ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F6
    ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6
    NP_001244867.1
    XP_014988542.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257938.1 → NP_001244867.1  ATP synthase-coupling factor 6, mitochondrial

      See identical proteins and their annotated locations for NP_001244867.1

      Status: PROVISIONAL

      Source sequence(s)
      JU323481
      UniProtKB/TrEMBL
      A0A1D5QZG5, A0A8J8XL47, F7E138, G7MNB3
      Related
      ENSMMUP00000081068.1, ENSMMUT00000104868.1
      Conserved Domains (1) summary
      pfam05511
      Location:1 → 96
      ATP-synt_F6; Mitochondrial ATP synthase coupling factor 6

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      20931791..20942485
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015133056.2 → XP_014988542.1  ATP synthase-coupling factor 6, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A1D5QZG5, A0A8J8XL47, F7E138, G7MNB3
      Related
      ENSMMUP00000053447.1, ENSMMUT00000069176.2
      Conserved Domains (1) summary
      pfam05511
      Location:1 → 96
      ATP-synt_F6; Mitochondrial ATP synthase coupling factor 6
    Nucleotide Protein
    Heading Accession and Version

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