U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TRUB2 TruB pseudouridine synthase family member 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717619, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TRUB2provided by VGNC
    Official Full Name
    TruB pseudouridine synthase family member 2provided by VGNC
    Primary source
    VGNC:VGNC:79065
    See related
    Ensembl:ENSMMUG00000014146
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TRUB2 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (12266666..12280288)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (10547116..10569246)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 27 member 4 Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene coenzyme Q4 Neighboring gene SWI5 homologous recombination repair protein Neighboring gene golgin A2 Neighboring gene dynamin 1 Neighboring gene microRNA mir-3154

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pseudouridine synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pseudouridine synthesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    probable tRNA pseudouridine synthase 2; mitochondrial mRNA pseudouridine synthase TRUB2
    Names
    TruB pseudouridine (psi) synthase homolog 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      12266666..12280288
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015116722.2 → XP_014972208.2  mitochondrial mRNA pseudouridine synthase TRUB2 isoform X3

      UniProtKB/TrEMBL
      G7NFS7
      Conserved Domains (1) summary
      cd02868
      Location:29 → 227
      PseudoU_synth_hTruB2_like; Pseudouridine synthase, humanTRUB2_like

    2. XM_015116720.2 → XP_014972206.2  mitochondrial mRNA pseudouridine synthase TRUB2 isoform X1

      UniProtKB/TrEMBL
      F7BVF3, G7NFS7
      Related
      ENSMMUP00000018588.3, ENSMMUT00000019856.4
      Conserved Domains (1) summary
      cd02868
      Location:11 → 283
      PseudoU_synth_hTruB2_like; Pseudouridine synthase, humanTRUB2_like

    3. XM_015116721.2 → XP_014972207.2  mitochondrial mRNA pseudouridine synthase TRUB2 isoform X2

      UniProtKB/TrEMBL
      G7NFS7
      Conserved Domains (1) summary
      cd02868
      Location:11 → 258
      PseudoU_synth_hTruB2_like; Pseudouridine synthase, humanTRUB2_like
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials