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    PGGT1B protein geranylgeranyltransferase type I subunit beta [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696437, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PGGT1Bprovided by VGNC
    Official Full Name
    protein geranylgeranyltransferase type I subunit betaprovided by VGNC
    Primary source
    VGNC:VGNC:75965
    Locus tag
    EGK_16759
    See related
    Ensembl:ENSMMUG00000005018
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PGGT1B in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (112747922..112800601, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (112655378..112714993, complement)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 36 Neighboring gene uncharacterized LOC114678884 Neighboring gene uncharacterized LOC106998899 Neighboring gene 40S ribosomal protein S2 pseudogene Neighboring gene coiled-coil domain containing 112

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables CAAX-protein geranylgeranyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein geranylgeranylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CAAX-protein geranylgeranyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    geranylgeranyl transferase type-1 subunit beta
    Names
    protein geranylgeranyltransferase type I, beta subunit
    NP_001248139.1
    XP_014996057.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261210.1 → NP_001248139.1  geranylgeranyl transferase type-1 subunit beta

      See identical proteins and their annotated locations for NP_001248139.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320500
      UniProtKB/TrEMBL
      A0A5S6RDE9, A0A8J8XJ20, F7ALB7, G7MVK1, I0FLT0
      Related
      ENSMMUP00000006648.3, ENSMMUT00000007076.3
      Conserved Domains (1) summary
      cd02895
      Location:22 → 332
      GGTase-I; Geranylgeranyltransferase types I (GGTase-I)-like proteins containing the protein prenyltransferase (PTase) domain, beta subunit (alpha 6 - alpha 6 barrel fold). GGTase-I s are a subgroup of the protein prenyltransferase family of lipid-modifying enzymes ...

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      112747922..112800601 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015140571.2 → XP_014996057.1  geranylgeranyl transferase type-1 subunit beta isoform X1

      UniProtKB/TrEMBL
      F7ALE0, I0FLT0
      Related
      ENSMMUP00000006646.3, ENSMMUT00000007074.4
      Conserved Domains (1) summary
      cd02895
      Location:22 → 332
      GGTase-I; Geranylgeranyltransferase types I (GGTase-I)-like proteins containing the protein prenyltransferase (PTase) domain, beta subunit (alpha 6 - alpha 6 barrel fold). GGTase-I s are a subgroup of the protein prenyltransferase family of lipid-modifying enzymes ...

    RNA

    1. XR_001445468.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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