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    DHX9 DExH-box helicase 9 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715453, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DHX9provided by VGNC
    Official Full Name
    DExH-box helicase 9provided by VGNC
    Primary source
    VGNC:VGNC:71766
    See related
    Ensembl:ENSMMUG00000005635
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DHX9 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (40088574..40137944)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (184481945..184531323, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994595 Neighboring gene N-acetylneuraminate pyruvate lyase Neighboring gene zinc finger protein ZIC 5-like Neighboring gene SHC binding and spindle associated 1 like Neighboring gene 60S ribosomal protein L21 pseudogene Neighboring gene natural cytotoxicity triggering receptor 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3'-5' DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables 3'-5' DNA/RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables double-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular anatomical structure IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-dependent RNA helicase A
    Names
    DEAH (Asp-Glu-Ala-His) box polypeptide 9
    DEAH-box helicase 9
    NP_001253117.1
    XP_014976949.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266188.1 → NP_001253117.1  ATP-dependent RNA helicase A

      See identical proteins and their annotated locations for NP_001253117.1

      Status: PROVISIONAL

      Source sequence(s)
      JV046326
      UniProtKB/TrEMBL
      F6W5Y4, H9FQQ0
      Related
      ENSMMUP00000007450.2, ENSMMUT00000007925.4
      Conserved Domains (6) summary
      smart00358
      Location:5 → 69
      DSRM; Double-stranded RNA binding motif
      smart00847
      Location:838 → 919
      HA2; Helicase associated domain (HA2) Add an annotation
      COG1643
      Location:381 → 1095
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
      cd00046
      Location:405 → 546
      DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
      pfam00271
      Location:635 → 768
      Helicase_C; Helicase conserved C-terminal domain
      pfam07717
      Location:959 → 1073
      OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      40088574..40137944
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015121463.1 → XP_014976949.1  ATP-dependent RNA helicase A isoform X1

      UniProtKB/TrEMBL
      H9FQQ0
      Conserved Domains (5) summary
      smart00847
      Location:624 → 705
      HA2; Helicase associated domain (HA2) Add an annotation
      COG1643
      Location:167 → 838
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
      cd00046
      Location:191 → 332
      DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
      pfam00271
      Location:421 → 554
      Helicase_C; Helicase conserved C-terminal domain
      pfam07717
      Location:745 → 859
      OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
    Nucleotide Protein
    Heading Accession and Version

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