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    CD5L CD5 molecule like [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718856, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CD5Lprovided by VGNC
    Official Full Name
    CD5 molecule likeprovided by VGNC
    Primary source
    VGNC:VGNC:70774
    See related
    Ensembl:ENSMMUG00000019835
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CD5L in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (93149856..93160561)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (132477350..132491017, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene kirre like nephrin family adhesion molecule 1 Neighboring gene uncharacterized LOC114670293 Neighboring gene 28S ribosomal protein S21, mitochondrial pseudogene Neighboring gene Fc receptor like 1 Neighboring gene Fc receptor like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CD5 antigen-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      93149856..93160561
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001116945.4 → XP_001116945.2  CD5 antigen-like

      UniProtKB/TrEMBL
      F7FUB7, G7ME25
      Related
      ENSMMUP00000026080.4, ENSMMUT00000027876.4
      Conserved Domains (1) summary
      smart00202
      Location:244 → 346
      SR; Scavenger receptor Cys-rich
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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