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    FOXJ3 forkhead box J3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696573, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FOXJ3provided by VGNC
    Official Full Name
    forkhead box J3provided by VGNC
    Primary source
    VGNC:VGNC:72596
    Locus tag
    EGK_00634
    See related
    Ensembl:ENSMMUG00000014138
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See FOXJ3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (182221395..182373368)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (41521685..41673996, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene zinc finger MYND-type containing 12 Neighboring gene phosphopantothenoylcysteine synthetase Neighboring gene ribosomal modification protein rimK like family member A Neighboring gene uncharacterized LOC106998035 Neighboring gene guanylate cyclase activator 2A Neighboring gene guanylate cyclase activator 2B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    forkhead box protein J3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266996.1 → NP_001253925.1  forkhead box protein J3

      See identical proteins and their annotated locations for NP_001253925.1

      Status: PROVISIONAL

      Source sequence(s)
      JV044424
      UniProtKB/TrEMBL
      A0A8J8Y7M6, F7C0R5, G7MGC3, I0FJ69
      Related
      ENSMMUP00000068581.1, ENSMMUT00000102104.1
      Conserved Domains (3) summary
      COG5025
      Location:54 → 335
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd20052
      Location:77 → 155
      FH_FOXJ3; Forkhead (FH) domain found in Forkhead box protein J3 (FOXJ3) and similar proteins
      cl41729
      Location:372 → 442
      KLF1_2_4_N; N-terminal domain of Kruppel-like factor (KLF) 1, KLF2, KLF4, and similar proteins

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      182221395..182373368
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015136169.2 → XP_014991655.1  forkhead box protein J3 isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y7M6, F7C0R5, G7MGC3, I0FJ69
      Related
      ENSMMUP00000064178.1, ENSMMUT00000084267.1
      Conserved Domains (3) summary
      COG5025
      Location:54 → 335
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd20052
      Location:77 → 155
      FH_FOXJ3; Forkhead (FH) domain found in Forkhead box protein J3 (FOXJ3) and similar proteins
      cl41729
      Location:372 → 442
      KLF1_2_4_N; N-terminal domain of Kruppel-like factor (KLF) 1, KLF2, KLF4, and similar proteins

    2. XM_028829248.1 → XP_028685081.1  forkhead box protein J3 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZYX6, F7C0R5
      Related
      ENSMMUP00000069853.1, ENSMMUT00000098516.1
      Conserved Domains (3) summary
      COG5025
      Location:54 → 307
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam15258
      Location:311 → 417
      FAM222A; Protein family of FAM222A
      pfam00250
      Location:78 → 162
      Forkhead; Forkhead domain

    3. XM_015136188.2 → XP_014991674.1  forkhead box protein J3 isoform X4

      UniProtKB/TrEMBL
      F7C0R5, F7C0S4
      Related
      ENSMMUP00000018578.4, ENSMMUT00000019844.4
      Conserved Domains (3) summary
      COG5025
      Location:54 → 301
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd20052
      Location:77 → 155
      FH_FOXJ3; Forkhead (FH) domain found in Forkhead box protein J3 (FOXJ3) and similar proteins
      cl41729
      Location:338 → 408
      KLF1_2_4_N; N-terminal domain of Kruppel-like factor (KLF) 1, KLF2, KLF4, and similar proteins

    4. XM_015136184.2 → XP_014991670.1  forkhead box protein J3 isoform X2

      UniProtKB/TrEMBL
      F7C0R5
      Related
      ENSMMUP00000018579.4, ENSMMUT00000019845.4
      Conserved Domains (3) summary
      COG5025
      Location:39 → 320
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd20052
      Location:62 → 140
      FH_FOXJ3; Forkhead (FH) domain found in Forkhead box protein J3 (FOXJ3) and similar proteins
      cl41729
      Location:357 → 427
      KLF1_2_4_N; N-terminal domain of Kruppel-like factor (KLF) 1, KLF2, KLF4, and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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