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    SREK1 splicing regulatory glutamic acid and lysine rich protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697731, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SREK1provided by VGNC
    Official Full Name
    splicing regulatory glutamic acid and lysine rich protein 1provided by VGNC
    Primary source
    VGNC:VGNC:77944
    See related
    Ensembl:ENSMMUG00000014586
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    SFRS12
    Orthologs
    human mouse all
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    Genomic context

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    See SREK1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (64738588..64777732)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (64342023..64381054)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene erbb2 interacting protein Neighboring gene U6 snRNA-associated Sm-like protein LSm8 Neighboring gene T-cell leukemia/lymphoma protein 1B pseudogene Neighboring gene U2 spliceosomal RNA Neighboring gene glucose-6-phosphate isomerase-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    splicing regulatory glutamine/lysine-rich protein 1
    Names
    splicing factor, arginine/serine-rich 12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      64738588..64777732
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015140153.2 → XP_014995639.1  splicing regulatory glutamine/lysine-rich protein 1 isoform X3

      UniProtKB/TrEMBL
      F7GRD8
      Conserved Domains (1) summary
      cd12260
      Location:62 → 147
      RRM2_SREK1; RNA recognition motif 2 (RRM2) found in splicing regulatory glutamine/lysine-rich protein 1 (SREK1) and similar proteins

    2. XM_015140155.2 → XP_014995641.1  splicing regulatory glutamine/lysine-rich protein 1 isoform X4

      UniProtKB/TrEMBL
      F7GRD8
      Conserved Domains (1) summary
      cd12260
      Location:62 → 147
      RRM2_SREK1; RNA recognition motif 2 (RRM2) found in splicing regulatory glutamine/lysine-rich protein 1 (SREK1) and similar proteins

    3. XM_028849479.1 → XP_028705312.1  splicing regulatory glutamine/lysine-rich protein 1 isoform X5

    4. XM_015140150.2 → XP_014995636.1  splicing regulatory glutamine/lysine-rich protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5K1V503, F7GRD8
      Related
      ENSMMUP00000019155.4, ENSMMUT00000020466.4
      Conserved Domains (2) summary
      cd12260
      Location:178 → 263
      RRM2_SREK1; RNA recognition motif 2 in splicing regulatory glutamine/lysine-rich protein 1 (SREK1) and similar proteins
      cd12519
      Location:20 → 99
      RRM1_SREK1; RNA recognition motif 1 in splicing regulatory glutamine/lysine-rich protein 1 (SREK1) and similar proteins

    5. XM_015140151.2 → XP_014995637.1  splicing regulatory glutamine/lysine-rich protein 1 isoform X2

      UniProtKB/TrEMBL
      F7GRD8
      Conserved Domains (2) summary
      cd12260
      Location:178 → 263
      RRM2_SREK1; RNA recognition motif 2 in splicing regulatory glutamine/lysine-rich protein 1 (SREK1) and similar proteins
      cd12519
      Location:20 → 99
      RRM1_SREK1; RNA recognition motif 1 in splicing regulatory glutamine/lysine-rich protein 1 (SREK1) and similar proteins

    6. XM_028849480.1 → XP_028705313.1  splicing regulatory glutamine/lysine-rich protein 1 isoform X6

    7. XM_015140152.2 → XP_014995638.1  splicing regulatory glutamine/lysine-rich protein 1 isoform X3

      UniProtKB/TrEMBL
      F7GRD8
      Conserved Domains (1) summary
      cd12260
      Location:62 → 147
      RRM2_SREK1; RNA recognition motif 2 (RRM2) found in splicing regulatory glutamine/lysine-rich protein 1 (SREK1) and similar proteins

    8. XM_028849478.1 → XP_028705311.1  splicing regulatory glutamine/lysine-rich protein 1 isoform X3

      UniProtKB/TrEMBL
      F7GRD8
      Conserved Domains (1) summary
      cd12260
      Location:62 → 147
      RRM2_SREK1; RNA recognition motif 2 (RRM2) found in splicing regulatory glutamine/lysine-rich protein 1 (SREK1) and similar proteins

    RNA

    1. XR_003730346.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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