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    PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714283, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PLOD3provided by VGNC
    Official Full Name
    procollagen-lysine,2-oxoglutarate 5-dioxygenase 3provided by VGNC
    Primary source
    VGNC:VGNC:76177
    See related
    Ensembl:ENSMMUG00000006949
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PLOD3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (43338654..43350765, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (126617757..126629997, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene putative diacylglycerol O-acyltransferase 2-like protein DGAT2L7P Neighboring gene 40S ribosomal protein SA-like Neighboring gene zinc finger HIT-type containing 1 Neighboring gene claudin 15

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-ascorbic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables procollagen glucosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables procollagen-lysine 5-dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-lysine hydroxylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      43338654..43350765 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015134529.2 → XP_014990015.2  multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3

      UniProtKB/TrEMBL
      F7E119, I0FW63
      Related
      ENSMMUP00000009121.4, ENSMMUT00000009711.4
      Conserved Domains (1) summary
      smart00702
      Location:572 → 735
      P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    Nucleotide Protein
    Heading Accession and Version

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