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    DET1 DET1 partner of COP1 E3 ubiquitin ligase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697994, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DET1provided by VGNC
    Official Full Name
    DET1 partner of COP1 E3 ubiquitin ligaseprovided by VGNC
    Primary source
    VGNC:VGNC:99197
    Locus tag
    EGK_17805
    See related
    Ensembl:ENSMMUG00000005758
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DET1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (67287988..67312528, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (66526542..66551113, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114679266 Neighboring gene mitochondrial ribosomal protein L46 Neighboring gene mitochondrial ribosomal protein S11 Neighboring gene uncharacterized LOC106999277 Neighboring gene microRNA mir-1179 Neighboring gene apoptosis enhancing nuclease

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-like ligase-substrate adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cullin-RING ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DET1 homolog
    Names
    DET1, COP1 ubiquitin ligase partner
    De-etiolated-1-like protein
    de-etiolated homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261519.1 → NP_001248448.1  DET1 homolog

      Status: PROVISIONAL

      Source sequence(s)
      JV043786
      UniProtKB/TrEMBL
      A0A1D5QKV5, A0A1D5RK46, A0A8J8Y1V5, G7MYR5
      Related
      ENSMMUP00000060690.1, ENSMMUT00000076834.2
      Conserved Domains (1) summary
      pfam09737
      Location:153 → 557
      Det1; De-etiolated protein 1 Det1

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      67287988..67312528 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850239.1 → XP_028706072.1  DET1 homolog isoform X4

      Conserved Domains (1) summary
      pfam09737
      Location:1 → 264
      Det1; De-etiolated protein 1 Det1

    2. XM_015142940.2 → XP_014998426.1  DET1 homolog isoform X1

      UniProtKB/TrEMBL
      A0A1D5QKV5, F6W1Q0, F7FPA5
      Related
      ENSMMUP00000007601.4, ENSMMUT00000008084.4
      Conserved Domains (1) summary
      pfam09737
      Location:142 → 546
      Det1; De-etiolated protein 1 Det1

    3. XM_028850236.1 → XP_028706069.1  DET1 homolog isoform X2

      UniProtKB/TrEMBL
      A0A1D5QKV5
      Conserved Domains (1) summary
      pfam09737
      Location:153 → 499
      Det1; De-etiolated protein 1 Det1

    4. XM_028850238.1 → XP_028706071.1  DET1 homolog isoform X4

      Conserved Domains (1) summary
      pfam09737
      Location:1 → 264
      Det1; De-etiolated protein 1 Det1

    5. XM_028850235.1 → XP_028706068.1  DET1 homolog isoform X1

      UniProtKB/TrEMBL
      A0A1D5QKV5, F6W1Q0, F7FPA5
      Related
      ENSMMUP00000048679.2, ENSMMUT00000064601.2
      Conserved Domains (1) summary
      pfam09737
      Location:142 → 546
      Det1; De-etiolated protein 1 Det1

    6. XM_028850237.1 → XP_028706070.1  DET1 homolog isoform X3

      Conserved Domains (1) summary
      pfam09737
      Location:153 → 435
      Det1; De-etiolated protein 1 Det1
    Nucleotide Protein
    Heading Accession and Version

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