U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SCIMP SLP adaptor and CSK interacting membrane protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 721635, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SCIMPprovided by VGNC
    Official Full Name
    SLP adaptor and CSK interacting membrane proteinprovided by VGNC
    Primary source
    VGNC:VGNC:77146
    See related
    Ensembl:ENSMMUG00000057987
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SCIMP in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (5000998..5025528, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (5109132..5133753, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 232 Neighboring gene zinc finger protein 594 Neighboring gene rabaptin, RAB GTPase binding effector protein 1 Neighboring gene nucleoporin 88 Neighboring gene RPA interacting protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in immunological synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in tetraspanin-enriched microdomain IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    SLP adapter and CSK-interacting membrane protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      5000998..5025528 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028835941.1 → XP_028691774.1  SLP adapter and CSK-interacting membrane protein isoform X2

      UniProtKB/TrEMBL
      G7NI49
      Conserved Domains (1) summary
      pfam15050
      Location:1 → 130
      SCIMP; SCIMP protein

    2. XM_015118383.2 → XP_014973869.1  SLP adapter and CSK-interacting membrane protein isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZRP6, G7NI49
      Related
      ENSMMUP00000068318.1, ENSMMUT00000091985.1
      Conserved Domains (1) summary
      pfam15050
      Location:1 → 132
      SCIMP; SCIMP protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials