U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TAFA3 TAFA chemokine like family member 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706250, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TAFA3provided by VGNC
    Official Full Name
    TAFA chemokine like family member 3provided by VGNC
    Primary source
    VGNC:VGNC:78190
    Locus tag
    EGK_01103
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    FAM19A3
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TAFA3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (111485934..111493545, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (113710538..113718952)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene putative uncharacterized protein encoded by LINC01356 Neighboring gene nuclear transport factor 2 Neighboring gene uncharacterized LOC114671128 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1J Neighboring gene ras homolog family member C

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables receptor ligand activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of microglial cell activation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuroblast differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of microglial cell activation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of neuroblast proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein FAM19A3; chemokine-like protein TAFA-3
    Names
    family with sequence similarity 19 member A3, C-C motif chemokine like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      111485934..111493545 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015148495.2 → XP_015003981.1  chemokine-like protein TAFA-3 isoform X2

      Conserved Domains (1) summary
      pfam12020
      Location:43 → 131
      TAFA; TAFA family

    2. XM_015148485.2 → XP_015003971.1  chemokine-like protein TAFA-3 isoform X1

      UniProtKB/TrEMBL
      G7MII5
      Conserved Domains (1) summary
      pfam12020
      Location:43 → 88
      TAFA; TAFA family

    3. XM_028830327.1 → XP_028686160.1  chemokine-like protein TAFA-3 isoform X1

      UniProtKB/TrEMBL
      G7MII5
      Conserved Domains (1) summary
      pfam12020
      Location:43 → 88
      TAFA; TAFA family

    4. XM_001108739.4 → XP_001108739.1  chemokine-like protein TAFA-3 isoform X2

      Conserved Domains (1) summary
      pfam12020
      Location:43 → 131
      TAFA; TAFA family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.