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    SFMBT1 Scm like with four mbt domains 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694961, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SFMBT1provided by VGNC
    Official Full Name
    Scm like with four mbt domains 1provided by VGNC
    Primary source
    VGNC:VGNC:77279
    See related
    Ensembl:ENSMMUG00000014527
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SFMBT1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (109083456..109238744, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (89119399..89275845)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene STIM activating enhancer Neighboring gene musculoskeletal, embryonic nuclear protein 1 Neighboring gene uncharacterized LOC114676360 Neighboring gene plasminogen activator inhibitor 1 RNA-binding protein pseudogene Neighboring gene RFT1 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    scm-like with four MBT domains protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      109083456..109238744 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130702.2 → XP_014986188.1  scm-like with four MBT domains protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A9B8, F7GAC2
      Conserved Domains (4) summary
      cd09581
      Location:782 → 866
      SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
      smart00454
      Location:793 → 857
      SAM; Sterile alpha motif
      smart00561
      Location:23 → 120
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam12140
      Location:502 → 617
      DUF3588; Protein of unknown function (DUF3588)

    2. XM_015130700.2 → XP_014986186.1  scm-like with four MBT domains protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A9B8, F7GAC2
      Related
      ENSMMUP00000073519.1, ENSMMUT00000092240.1
      Conserved Domains (4) summary
      cd09581
      Location:782 → 866
      SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
      smart00454
      Location:793 → 857
      SAM; Sterile alpha motif
      smart00561
      Location:23 → 120
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam12140
      Location:502 → 617
      DUF3588; Protein of unknown function (DUF3588)

    3. XM_015130698.2 → XP_014986184.1  scm-like with four MBT domains protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A9B8, F7GAC2
      Conserved Domains (4) summary
      cd09581
      Location:782 → 866
      SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
      smart00454
      Location:793 → 857
      SAM; Sterile alpha motif
      smart00561
      Location:23 → 120
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam12140
      Location:502 → 617
      DUF3588; Protein of unknown function (DUF3588)

    4. XM_015130699.2 → XP_014986185.1  scm-like with four MBT domains protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A9B8, F7GAC2
      Conserved Domains (4) summary
      cd09581
      Location:782 → 866
      SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
      smart00454
      Location:793 → 857
      SAM; Sterile alpha motif
      smart00561
      Location:23 → 120
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam12140
      Location:502 → 617
      DUF3588; Protein of unknown function (DUF3588)

    5. XM_028844234.1 → XP_028700067.1  scm-like with four MBT domains protein 1 isoform X2

      UniProtKB/TrEMBL
      F7GAC2
      Conserved Domains (3) summary
      cd09581
      Location:768 → 852
      SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
      smart00561
      Location:9 → 106
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam12140
      Location:488 → 603
      SLED; SLED domain

    6. XM_028844235.1 → XP_028700068.1  scm-like with four MBT domains protein 1 isoform X2

      UniProtKB/TrEMBL
      F7GAC2
      Conserved Domains (3) summary
      cd09581
      Location:768 → 852
      SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
      smart00561
      Location:9 → 106
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam12140
      Location:488 → 603
      SLED; SLED domain

    7. XM_015130703.2 → XP_014986189.1  scm-like with four MBT domains protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A9B8, F7GAC2
      Related
      ENSMMUP00000019076.3, ENSMMUT00000020381.4
      Conserved Domains (4) summary
      cd09581
      Location:782 → 866
      SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
      smart00454
      Location:793 → 857
      SAM; Sterile alpha motif
      smart00561
      Location:23 → 120
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam12140
      Location:502 → 617
      DUF3588; Protein of unknown function (DUF3588)
    Nucleotide Protein
    Heading Accession and Version

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