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    SFR1 SWI5 dependent homologous recombination repair protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715145, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SFR1provided by VGNC
    Official Full Name
    SWI5 dependent homologous recombination repair protein 1provided by VGNC
    Primary source
    VGNC:VGNC:106099
    See related
    Ensembl:ENSMMUG00000044990
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SFR1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (104683153..104688338)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (99941364..99946584)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114670032 Neighboring gene microRNA mir-936 Neighboring gene cilia and flagella associated protein 43 Neighboring gene uncharacterized LOC107000260 Neighboring gene microRNA mir-609

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear receptor coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Swi5-Sfr1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    swi5-dependent recombination DNA repair protein 1 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      104683153..104688338
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015148101.2 → XP_015003587.2  swi5-dependent recombination DNA repair protein 1 homolog isoform X2

      UniProtKB/TrEMBL
      A0A1D5RJP0
      Related
      ENSMMUP00000060534.2, ENSMMUT00000055115.2
      Conserved Domains (1) summary
      pfam10376
      Location:12 → 223
      Mei5; Double-strand recombination repair protein

    2. XM_001114219.4 → XP_001114219.2  swi5-dependent recombination DNA repair protein 1 homolog isoform X1

      UniProtKB/TrEMBL
      A0A1D5RJP0, A0A5F8A150
      Related
      ENSMMUP00000070655.1, ENSMMUT00000094851.1
      Conserved Domains (1) summary
      pfam10376
      Location:25 → 236
      Mei5; Double-strand recombination repair protein
    Nucleotide Protein
    Heading Accession and Version

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