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    PAX1 paired box 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706866, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PAX1provided by VGNC
    Official Full Name
    paired box 1provided by VGNC
    Primary source
    VGNC:VGNC:75760
    See related
    Ensembl:ENSMMUG00000019409
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PAX1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (44784631..44794869, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (54857526..54870470)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107000513 Neighboring gene uncharacterized LOC114670604 Neighboring gene uncharacterized LOC107000510 Neighboring gene uncharacterized LOC107000509 Neighboring gene uncharacterized LOC114670432 Neighboring gene NK2 homeobox 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anatomical structure development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    paired box protein Pax-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      44784631..44794869 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015149591.2 → XP_015005077.1  paired box protein Pax-1 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZNN4
      Related
      ENSMMUP00000066239.1, ENSMMUT00000097455.1
      Conserved Domains (1) summary
      cd00131
      Location:98 → 225
      PAX; Paired Box domain

    2. XM_001095275.4 → XP_001095275.3  paired box protein Pax-1 isoform X1

      Conserved Domains (1) summary
      cd00131
      Location:98 → 225
      PAX; Paired Box domain
    Nucleotide Protein
    Heading Accession and Version

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