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    HARBI1 harbinger transposase derived 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714376, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HARBI1provided by VGNC
    Official Full Name
    harbinger transposase derived 1provided by VGNC
    Primary source
    VGNC:VGNC:107451
    Locus tag
    EGK_06309
    See related
    Ensembl:ENSMMUG00000059160
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See HARBI1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (19148471..19165786)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (19423114..19439065)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672266 Neighboring gene zinc finger protein 408 Neighboring gene Rho GTPase activating protein 1 Neighboring gene autophagy related 13 Neighboring gene autophagy and beclin 1 regulator 1 Neighboring gene cholinergic receptor muscarinic 4 Neighboring gene midkine

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    putative nuclease HARBI1
    NP_001248435.1
    XP_014969688.1
    XP_014969689.1
    XP_014969690.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261506.2 → NP_001248435.1  putative nuclease HARBI1

      See identical proteins and their annotated locations for NP_001248435.1

      Status: PROVISIONAL

      Source sequence(s)
      JU471418
      UniProtKB/TrEMBL
      A0A8J8XT55, F7CH91, G7NDH1
      Related
      ENSMMUP00000067038.1, ENSMMUT00000102000.1
      Conserved Domains (1) summary
      pfam13359
      Location:148 → 300
      DDE_Tnp_4; DDE superfamily endonuclease

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      19148471..19165786
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015114203.2 → XP_014969689.1  putative nuclease HARBI1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XT55, F7CH91, G7NDH1
      Related
      ENSMMUP00000079118.1, ENSMMUT00000081386.1
      Conserved Domains (1) summary
      pfam13359
      Location:148 → 300
      DDE_Tnp_4; DDE superfamily endonuclease

    2. XM_015114204.2 → XP_014969690.1  putative nuclease HARBI1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XT55, F7CH91, G7NDH1
      Related
      ENSMMUP00000061502.1, ENSMMUT00000103780.1
      Conserved Domains (1) summary
      pfam13359
      Location:148 → 300
      DDE_Tnp_4; DDE superfamily endonuclease

    3. XM_015114202.2 → XP_014969688.1  putative nuclease HARBI1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XT55, F7CH91, G7NDH1
      Conserved Domains (1) summary
      pfam13359
      Location:148 → 300
      DDE_Tnp_4; DDE superfamily endonuclease
    Nucleotide Protein
    Heading Accession and Version

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