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    MANSC1 MANSC domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696667, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MANSC1provided by VGNC
    Official Full Name
    MANSC domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:74358
    Locus tag
    EGK_03394
    See related
    Ensembl:ENSMMUG00000018577
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See MANSC1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (13704889..13732468, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (12985130..13013794, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene LDL receptor related protein 6 Neighboring gene U6 spliceosomal RNA Neighboring gene ubiquitin-conjugating enzyme E2 variant 1 pseudogene Neighboring gene BLOC-1 related complex subunit 5 Neighboring gene AP-3 complex subunit sigma-1 pseudogene Neighboring gene dual specificity phosphatase 16

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    MANSC domain-containing protein 1
    Names
    Loss of heterozygosity 12 chromosomal region 3 protein
    NP_001180682.1
    XP_015006566.1
    XP_028684648.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193753.2 → NP_001180682.1  MANSC domain-containing protein 1 precursor

      See identical proteins and their annotated locations for NP_001180682.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000058
      UniProtKB/TrEMBL
      A0A1D5R7E9, A0A8J8XT23, F6YFU6, G7N678, H9EYA6
      Related
      ENSMMUP00000056238.1, ENSMMUT00000065354.2
      Conserved Domains (2) summary
      smart00765
      Location:25 → 117
      MANEC; The MANEC domain, formerly called MANSC
      pfam05109
      Location:229 → 356
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      13704889..13732468 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015151080.2 → XP_015006566.1  MANSC domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5R7E9, A0A8J8XT23, F6YFU6, G7N678, H9EYA6
      Related
      ENSMMUP00000024434.4, ENSMMUT00000026111.4
      Conserved Domains (2) summary
      smart00765
      Location:25 → 117
      MANEC; The MANEC domain, formerly called MANSC
      pfam05109
      Location:229 → 356
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

    2. XM_028828815.1 → XP_028684648.1  MANSC domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5R7E9, A0A8J8XT23, F6YFU6, G7N678, H9EYA6
      Conserved Domains (2) summary
      smart00765
      Location:25 → 117
      MANEC; The MANEC domain, formerly called MANSC
      pfam05109
      Location:229 → 356
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    Nucleotide Protein
    Heading Accession and Version

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