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    ILRUN inflammation and lipid regulator with UBA-like and NBR1-like domains [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718675, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ILRUNprovided by VGNC
    Official Full Name
    inflammation and lipid regulator with UBA-like and NBR1-like domainsprovided by VGNC
    Primary source
    VGNC:VGNC:83428
    See related
    Ensembl:ENSMMUG00000022824
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C4H6orf106
    Orthologs
    human mouse all
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    Genomic context

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    See ILRUN in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (134789572..134944825)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (35453627..35570494, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114677624 Neighboring gene small nuclear ribonucleoprotein polypeptide C Neighboring gene V-type proton ATPase subunit F pseudogene Neighboring gene small nucleolar RNA U13 Neighboring gene small nucleolar RNA U13 Neighboring gene 60S ribosomal protein L7 pseudogene Neighboring gene interferon-induced transmembrane protein 3 pseudogene Neighboring gene SAM pointed domain containing ETS transcription factor Neighboring gene protein kinase C and casein kinase substrate in neurons 1 Neighboring gene ribosomal protein S10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in macroautophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein C6orf106 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      134789572..134944825
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028847662.1 → XP_028703495.1  uncharacterized protein C6orf106 homolog isoform X3

      Conserved Domains (2) summary
      cd14349
      Location:23 → 64
      UBA_CF106; UBA-like domain found in uncharacterized protein C6orf106 and similar proteins
      cd14947
      Location:71 → 169
      NBR1_like; Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins

    2. XM_001116536.4 → XP_001116536.1  uncharacterized protein C6orf106 homolog isoform X4

      See identical proteins and their annotated locations for XP_001116536.1

      UniProtKB/TrEMBL
      F6UNN2, H9ET27
      Related
      ENSMMUP00000030051.4, ENSMMUT00000032121.4
      Conserved Domains (2) summary
      cd14349
      Location:23 → 64
      UBA_CF106; UBA-like domain found in uncharacterized protein C6orf106 and similar proteins
      cl22423
      Location:71 → 169
      NBR1_like; Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins

    3. XM_028847661.1 → XP_028703494.1  uncharacterized protein C6orf106 homolog isoform X1

      UniProtKB/TrEMBL
      H9ETS4
      Conserved Domains (2) summary
      cd14349
      Location:23 → 64
      UBA_CF106; UBA-like domain found in uncharacterized protein C6orf106 and similar proteins
      cd14947
      Location:71 → 180
      NBR1_like; Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins

    4. XM_001116543.4 → XP_001116543.2  uncharacterized protein C6orf106 homolog isoform X2

      UniProtKB/TrEMBL
      F6UNL0, H9ETS4
      Related
      ENSMMUP00000030052.4, ENSMMUT00000032122.4
      Conserved Domains (2) summary
      cd14349
      Location:23 → 64
      UBA_CF106; UBA-like domain found in uncharacterized protein C6orf106 and similar proteins
      cd14947
      Location:71 → 180
      NBR1_like; Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins
    Nucleotide Protein
    Heading Accession and Version

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