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    GABRA2 gamma-aminobutyric acid type A receptor subunit alpha2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703894, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GABRA2provided by VGNC
    Official Full Name
    gamma-aminobutyric acid type A receptor subunit alpha2provided by VGNC
    Primary source
    VGNC:VGNC:72847
    Locus tag
    EGK_15690
    See related
    Ensembl:ENSMMUG00000003614
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GABRA2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (45572754..45726589, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (46176516..46330035, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein SA-like Neighboring gene uncharacterized LOC106998324 Neighboring gene gamma-aminobutyric acid type A receptor subunit gamma1 Neighboring gene U6 spliceosomal RNA Neighboring gene cytochrome c oxidase subunit VIIb2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protracted developmental trajectories of GABAA receptor alpha1 and alpha2 subunit expression in primate prefrontal cortex. Hashimoto T, et al. Biol Psychiatry, 2009 Jun 15. PMID 19249749, Free PMC Article
    2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    3. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. the developmental shift in GABA(A) receptor alpha subunit expression continues through adolescence in primate dorsolateral prefrontal cortex
      Title: Protracted developmental trajectories of GABAA receptor alpha1 and alpha2 subunit expression in primate prefrontal cortex.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GABA-A receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GABA-gated chloride ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables benzodiazepine receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables inhibitory extracellular ligand-gated monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chloride transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in gamma-aminobutyric acid signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nervous system process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of postsynaptic membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic transmission, GABAergic IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of GABA-A receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dendrite membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gamma-aminobutyric acid receptor subunit alpha-2
    Names
    GABA(A) receptor subunit alpha-2
    gamma-aminobutyric acid type A receptor alpha2 subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261668.1 → NP_001248597.1  gamma-aminobutyric acid receptor subunit alpha-2 precursor

      See identical proteins and their annotated locations for NP_001248597.1

      Status: PROVISIONAL

      Source sequence(s)
      JU333817
      UniProtKB/TrEMBL
      A0A1D5Q6W6, A0A5S6R9X0, A0A8J8Y551, F6U2C0, G7MSU6
      Related
      ENSMMUP00000035293.3, ENSMMUT00000042291.3
      Conserved Domains (2) summary
      TIGR00860
      Location:25 → 440
      LIC; Cation transporter family protein
      cd19035
      Location:47 → 249
      LGIC_ECD_GABAAR_A2; extracellular domain of gamma-aminobutyric acid receptor subunit alpha-2 (GABAAR-A2 or GABRA2)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      45572754..45726589 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015138315.2 → XP_014993801.1  gamma-aminobutyric acid receptor subunit alpha-2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q6W6
      Conserved Domains (2) summary
      pfam02931
      Location:16 → 195
      Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
      pfam02932
      Location:202 → 382
      Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region

    2. XM_015138316.2 → XP_014993802.1  gamma-aminobutyric acid receptor subunit alpha-2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q6W6, A0A5S6R9X0, A0A8J8Y551, F6U2C0, G7MSU6
      Related
      ENSMMUP00000043782.2, ENSMMUT00000066486.2
      Conserved Domains (2) summary
      TIGR00860
      Location:25 → 440
      LIC; Cation transporter family protein
      cd19035
      Location:47 → 249
      LGIC_ECD_GABAAR_A2; extracellular domain of gamma-aminobutyric acid receptor subunit alpha-2 (GABAAR-A2 or GABRA2)

    3. XM_028848080.1 → XP_028703913.1  gamma-aminobutyric acid receptor subunit alpha-2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q6W6, A0A5S6R9X0, A0A8J8Y551, F6U2C0, G7MSU6
      Conserved Domains (2) summary
      TIGR00860
      Location:25 → 440
      LIC; Cation transporter family protein
      cd19035
      Location:47 → 249
      LGIC_ECD_GABAAR_A2; extracellular domain of gamma-aminobutyric acid receptor subunit alpha-2 (GABAAR-A2 or GABRA2)

    4. XM_028848081.1 → XP_028703914.1  gamma-aminobutyric acid receptor subunit alpha-2 isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q6W6, F6QF32
      Related
      ENSMMUP00000004824.4, ENSMMUT00000005120.4
      Conserved Domains (2) summary
      TIGR00860
      Location:25 → 500
      LIC; Cation transporter family protein
      cd19035
      Location:47 → 249
      LGIC_ECD_GABAAR_A2; extracellular domain of gamma-aminobutyric acid receptor subunit alpha-2 (GABAAR-A2 or GABRA2)

    5. XM_028848079.1 → XP_028703912.1  gamma-aminobutyric acid receptor subunit alpha-2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q6W6, A0A5S6R9X0, A0A8J8Y551, F6U2C0, G7MSU6
      Conserved Domains (2) summary
      TIGR00860
      Location:25 → 440
      LIC; Cation transporter family protein
      cd19035
      Location:47 → 249
      LGIC_ECD_GABAAR_A2; extracellular domain of gamma-aminobutyric acid receptor subunit alpha-2 (GABAAR-A2 or GABRA2)
    Nucleotide Protein
    Heading Accession and Version

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