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    CCDC85A coiled-coil domain containing 85A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717376, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CCDC85Aprovided by VGNC
    Official Full Name
    coiled-coil domain containing 85Aprovided by VGNC
    Primary source
    VGNC:VGNC:70905
    See related
    Ensembl:ENSMMUG00000015888
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CCDC85A in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (52287459..52483839, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (57152201..57349683)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA64/SNORA10 family Neighboring gene 40S ribosomal protein S2-like Neighboring gene uncharacterized LOC114671705 Neighboring gene basic proline-rich protein Neighboring gene uncharacterized LOC100429052 Neighboring gene 28S ribosomal protein S10, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coiled-coil domain-containing protein 85A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      52287459..52483839 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002808042.3 → XP_002808088.2  coiled-coil domain-containing protein 85A isoform X3

      UniProtKB/TrEMBL
      A0A1D5QUR1, F7BVP9, I2CTW1
      Related
      ENSMMUP00000020892.3, ENSMMUT00000022330.4
      Conserved Domains (1) summary
      pfam10226
      Location:31 → 204
      DUF2216; Uncharacterized conserved proteins (DUF2216)

    2. XM_028831645.1 → XP_028687478.1  coiled-coil domain-containing protein 85A isoform X1

      UniProtKB/TrEMBL
      A0A1D5QUR1
      Related
      ENSMMUP00000051791.2, ENSMMUT00000064300.2
      Conserved Domains (2) summary
      PTZ00449
      Location:221 → 324
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      pfam10226
      Location:31 → 204
      CCDC85; CCDC85 family

    3. XM_028831647.1 → XP_028687480.1  coiled-coil domain-containing protein 85A isoform X4

      UniProtKB/TrEMBL
      A0A1D5QUR1, A0A1D5RKM9
      Related
      ENSMMUP00000060873.2, ENSMMUT00000055035.2
      Conserved Domains (2) summary
      PTZ00449
      Location:221 → 324
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      pfam10226
      Location:31 → 204
      CCDC85; CCDC85 family

    4. XM_028831648.1 → XP_028687481.1  coiled-coil domain-containing protein 85A isoform X5

      UniProtKB/TrEMBL
      A0A1D5QUR1
      Conserved Domains (2) summary
      PTZ00449
      Location:221 → 324
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      pfam10226
      Location:31 → 204
      CCDC85; CCDC85 family

    5. XM_028831649.1 → XP_028687482.1  coiled-coil domain-containing protein 85A isoform X6

      Conserved Domains (2) summary
      PTZ00449
      Location:221 → 324
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      pfam10226
      Location:31 → 204
      CCDC85; CCDC85 family

    6. XM_028831650.1 → XP_028687483.1  coiled-coil domain-containing protein 85A isoform X7

      Conserved Domains (2) summary
      PTZ00449
      Location:221 → 324
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      pfam10226
      Location:31 → 204
      CCDC85; CCDC85 family

    7. XM_028831646.1 → XP_028687479.1  coiled-coil domain-containing protein 85A isoform X2

      UniProtKB/TrEMBL
      A0A1D5QUR1, A0A5F8A5W3
      Related
      ENSMMUP00000073326.1, ENSMMUT00000096199.1
      Conserved Domains (2) summary
      PTZ00449
      Location:221 → 324
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      pfam10226
      Location:31 → 204
      CCDC85; CCDC85 family
    Nucleotide Protein
    Heading Accession and Version

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