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    NFYB nuclear transcription factor Y subunit beta [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700451, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NFYBprovided by VGNC
    Official Full Name
    nuclear transcription factor Y subunit betaprovided by VGNC
    Primary source
    VGNC:VGNC:97795
    See related
    Ensembl:ENSMMUG00000022570
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See NFYB in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (103823416..103845311, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (104034659..104055906, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene glycosyltransferase 8 domain containing 2 Neighboring gene host cell factor C2 Neighboring gene small nuclear ribonucleoprotein F-like Neighboring gene translation initiation factor IF-2-like Neighboring gene 60S ribosomal protein L9-like Neighboring gene 60S ribosomal protein L28 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CCAAT-binding factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear transcription factor Y subunit beta
    Names
    nuclear transcription factor Y, beta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257720.1 → NP_001244649.1  nuclear transcription factor Y subunit beta

      See identical proteins and their annotated locations for NP_001244649.1

      Status: PROVISIONAL

      Source sequence(s)
      JU334673
      UniProtKB/TrEMBL
      A0A1D5Q0C9, A0A5F8AQT3
      Related
      ENSMMUP00000041491.1, ENSMMUT00000056242.2
      Conserved Domains (1) summary
      pfam00808
      Location:57 → 122
      CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      103823416..103845311 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015152549.2 → XP_015008035.1  nuclear transcription factor Y subunit beta isoform X1

      UniProtKB/TrEMBL
      A0A5F8AQT3, F6ZKY2
      Related
      ENSMMUP00000029708.4, ENSMMUT00000031753.4
      Conserved Domains (1) summary
      pfam00808
      Location:58 → 123
      CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone

    2. XM_015152552.2 → XP_015008038.1  nuclear transcription factor Y subunit beta isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q0C9, A0A5F8AQT3
      Conserved Domains (1) summary
      pfam00808
      Location:57 → 122
      CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone

    3. XM_015152553.2 → XP_015008039.1  nuclear transcription factor Y subunit beta isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q0C9, A0A5F8AQT3
      Conserved Domains (1) summary
      pfam00808
      Location:57 → 122
      CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone

    4. XM_015152550.2 → XP_015008036.1  nuclear transcription factor Y subunit beta isoform X1

      UniProtKB/TrEMBL
      A0A5F8AQT3, F6ZKY2
      Conserved Domains (1) summary
      pfam00808
      Location:58 → 123
      CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone
    Nucleotide Protein
    Heading Accession and Version

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